G273359


Basic Information

Item Value
gene id G273359
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 477727 ~ 479081 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310194
GAGAAAGCGCCGTTTGTTTTGTTTTTCACGCGTTATAAAGCTTCGTCGTGCCTCTGGATGGTTTTTATTTCTGAATTGTAAACGTCGCCAGCACTTTTAAGAGGGAGTCGGGATATTTTTGTCCTAATGTCAAAGAGCAGCGCGCGGCCTTGGAACATTCAAACGTGCTGTTCTTCACTAACTTAACTGTTACTTGCTGTATAGTGGAAACATACATGTGTTGAACGGATCGAAAGGGGAATCCTGCTGAAAAGGGAGTTGCATCACTGCGTTTTTGATTGAAATGGATAGATCCACACTGACCTGTCTCATATAAAGTGTGATTAAATGCTTTTAATTCTTTCAGTCTGTTCAGTGAGAGTGAATTATATGTTTTGGAGTCTATGACACACTCAATTTACTCTCGGTTAGATTCAGTTGAATCGCTAATCAACGAGCTTCCATATATGTTTTATCTTGGCCTATTTTTTGTCAATGTCTTAATTCTCTACTATGCCTTTTTAATGGAATACATAGTCCTTAATGTAGGGATAGTATTTTTGCCAGAGGATATGGACCAGGCACTAGTGGATTTGGGTGTTCTCTCTGACCCAGCCTCTATTCCCTATGACACAGACACTGAGCTGGATGTTTTTGAGGGATATCTGGAATAAACTACTATGACTGGCAATCGCAGCCGAAGCTTTTGTGGGGAAGGTGTCATTTGGCTGATTCATTTGGTTACTGGAGAGTCATTGTCAAAAGGAACTACATATCATCTCTGCAGACATAAAAATATATTGCAGTGGTCAAATTATAAAAAAATGGCTTTAAGGAATAAGCTGTCCAGGTTCAGGGGACTGACCTGCAAGCAAGCTATCGTGCCACATGGAATATTTACCCGGAACAGATAAGCCGAACGGACTATGTGGTTTTCCATGGAGCCGCCAGTCAGTATCTCTTCAGAGATCAAATTCTGGCACTAACCACTACTGTGGATATAAATATTGCATTAGCCTATTTATTTTTAGTTTGGCATTCAGCATTCAAGCAGGATTCTGTGTCAGCCCTGCAAGGGCTTGTTATTACCTGTAGACAAATCCCTTATTTATAAATGGTCTGCCTCAGCATGGTTTCATTCCCTTTAATGCTATTCAAATAAGCAATACGTCATGAGACAAACAGGGTGTTCTGAATTTTTCTATAAGACTGTCTTTGGAACCTCATATTTGTGACAGCCTGAAAATGATATATTTGAGTTTCAGTTACCCATTCTCTCTCTCTCTCTCTCTCTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310194 True 1275 TUCP 0.40 2 477727 479081

Neighbor

gene id symbol gene type direction distance location
CI01000069_00403871_00404476 SOCS1A coding upstream 73234 403606 ~ 404493 (+)
CI01000069_00357901_00365747 NA coding upstream 111208 357901 ~ 366519 (+)
CI01000069_00246608_00247385 NA coding upstream 229548 246511 ~ 248179 (+)
CI01000069_00147622_00154047 NA coding upstream 323659 147507 ~ 154068 (+)
CI01000069_00091982_00141515 RHOT1, RHOT1A coding upstream 335411 91674 ~ 142316 (+)
CI01000069_00575065_00578555 EMP2 coding downstream 95984 575065 ~ 578643 (+)
CI01000069_00596413_00741443 GRIN2A coding downstream 117332 596413 ~ 741443 (+)
CI01000069_00743257_00745220 NA coding downstream 264101 743182 ~ 746071 (+)
CI01000069_00910238_00919183 NA coding downstream 430805 909886 ~ 919703 (+)
CI01000069_00925578_00927804 NA coding downstream 446238 925319 ~ 927819 (+)
G273400 NA non-coding upstream 17631 458797 ~ 460096 (+)
G273338 NA non-coding upstream 145415 332038 ~ 332312 (+)
G273333 NA non-coding upstream 185330 292185 ~ 292397 (+)
G273284 NA non-coding upstream 211573 175998 ~ 266154 (+)
G273282 NA non-coding upstream 303674 173711 ~ 174053 (+)
G273401 NA non-coding downstream 3733 482814 ~ 483227 (+)
G273407 NA non-coding downstream 24565 503646 ~ 504146 (+)
G273408 NA non-coding downstream 25784 504865 ~ 505120 (+)
G273456 NA non-coding downstream 277924 757005 ~ 757242 (+)
G273459 NA non-coding downstream 282488 761569 ~ 761771 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 1554319 2031954 ~ 2040427 (+)
G274270 NA other downstream 2193543 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 2413765 2893418 ~ 2894947 (+)
G274603 NA other downstream 3320942 3800023 ~ 3803501 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_025387 dexi coding NC_007114.7 CM002887.2 26905024 ~ 26906351 (+)