XLOC_010500 (CR388102.5)


Basic Information

Item Value
gene id XLOC_010500
gene name CR388102.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007127.7
NCBI id CM002900.2
chromosome length 55266484
location 12253415 ~ 12253471 (-)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00020606
TTGGAAAATATCTCTTTTACTATTTGTCCAGTAGGTTTCCTTTAAAAGGAAACCCAT

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000083638

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00020606 True 57 snRNA 0.32 1 12253415 12253471

Neighbor

gene id symbol gene type direction distance location
XLOC_010499 CR388102.4 coding downstream 3092 12250268 ~ 12250323 (-)
XLOC_010498 CR388102.2 coding downstream 5495 12247862 ~ 12247920 (-)
XLOC_010497 CR388102.3 coding downstream 13955 12239407 ~ 12239460 (-)
XLOC_010496 lpcat3 coding downstream 17053 12174437 ~ 12236362 (-)
XLOC_010495 clstn3 coding downstream 79768 12102336 ~ 12173647 (-)
XLOC_010501 leng8 coding upstream 3056 12256527 ~ 12266153 (-)
XLOC_010502 CR388102.7 coding upstream 12895 12266366 ~ 12291045 (-)
XLOC_010503 trpv6 coding upstream 40813 12294284 ~ 12319822 (-)
XLOC_010504 ephb6 coding upstream 81803 12335274 ~ 12470034 (-)
XLOC_010505 slc2a3b coding upstream 221390 12474861 ~ 12496632 (-)
XLOC_010626 CR392024.2 misc upstream 8641641 20895112 ~ 20895175 (-)
XLOC_010492 CU467865.1 non-coding downstream 241227 12012074 ~ 12012188 (-)
XLOC_010491 NA non-coding downstream 248331 11992566 ~ 12005084 (-)
XLOC_010507 CU694256.1 non-coding upstream 271261 12524732 ~ 12532027 (-)
XLOC_010508 NA non-coding upstream 309759 12563230 ~ 12566004 (-)
XLOC_010517 NA non-coding upstream 1187266 13440737 ~ 13480372 (-)
XLOC_010519 BX323458.2 non-coding upstream 1268828 13522299 ~ 13542460 (-)
XLOC_010520 NA non-coding upstream 1291822 13545293 ~ 13551327 (-)

Expression


Co-expression Network