G273456


Basic Information

Item Value
gene id G273456
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 757005 ~ 757242 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310295
CCGGAAGTCCTAAAATGCTAACTCGCTTCCGGGTTTTGCCTACAAAAACACGTCATCCCTGAGGTACTCTATTGCATGGTAAACTGAACGATTTTAATGAATGTAACGTTAATGCATGTATGAATATATCCATACAAAGCAAATGACCCTCAATACATCTAAAATAAAAACATAGATTTTATAGAGGTAATCAACGTAAAAATTGATTTAATAATTATAAATTATCTTTTTTTCTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310295 True 238 lncRNA 0.32 1 757005 757242

Neighbor

gene id symbol gene type direction distance location
CI01000069_00743257_00745220 NA coding upstream 10934 743182 ~ 746071 (+)
CI01000069_00596413_00741443 GRIN2A coding upstream 15562 596413 ~ 741443 (+)
CI01000069_00575065_00578555 EMP2 coding upstream 178362 575065 ~ 578643 (+)
CI01000069_00403871_00404476 SOCS1A coding upstream 352512 403606 ~ 404493 (+)
CI01000069_00357901_00365747 NA coding upstream 390486 357901 ~ 366519 (+)
CI01000069_00910238_00919183 NA coding downstream 152644 909886 ~ 919703 (+)
CI01000069_00925578_00927804 NA coding downstream 168077 925319 ~ 927819 (+)
CI01000069_00932460_00950854 USP7.S, USP7 coding downstream 175068 932310 ~ 951447 (+)
CI01000069_00962392_00964350 NA coding downstream 203570 959810 ~ 964499 (+)
CI01000069_00966300_00979227 CLCN7 coding downstream 209058 966300 ~ 980520 (+)
G273408 NA non-coding upstream 251885 504865 ~ 505120 (+)
G273407 NA non-coding upstream 252859 503646 ~ 504146 (+)
G273401 NA non-coding upstream 273778 482814 ~ 483227 (+)
G273400 NA non-coding upstream 296909 458797 ~ 460096 (+)
G273338 NA non-coding upstream 424693 332038 ~ 332312 (+)
G273459 NA non-coding downstream 4327 761569 ~ 761771 (+)
G273761 NA non-coding downstream 165206 922448 ~ 924406 (+)
G273770 NA non-coding downstream 265928 1023170 ~ 1023898 (+)
G273827 NA non-coding downstream 327490 1084732 ~ 1084941 (+)
G273359 NA other upstream 277924 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 1276158 2031954 ~ 2040427 (+)
G274270 NA other downstream 1915382 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 2135604 2893418 ~ 2894947 (+)
G274603 NA other downstream 3042781 3800023 ~ 3803501 (+)

Expression


Co-expression Network