G273728


Basic Information

Item Value
gene id G273728
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 775331 ~ 775658 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310594
CCGATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAAAAGGAATGCAATGATGTGGAAGTTTCAAATTTCAATATTTTATTCAGAATACAACATAGATGACATATCAAATGTTTAAACTGAGAAAATGTATAATTTTAAGGGAAAAATAAGTTGATTTTAAATTTCATGGCATCAACACATCTCAAAAAAGTTGGGACAAGGCCATGTTTACCACTGTGTGGCATCCCCTCTTCTTTTTATAACAGTCTGCAAACGTCTGGGGACTGAGGAGACAAGTTGCTCAAGTTTAGGAATAGGAATGTTGTCCCATTCTTGTCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310594 True 328 lncRNA 0.34 1 775331 775658

Neighbor

gene id symbol gene type direction distance location
CI01000069_00583939_00586883 NA coding downstream 188448 583794 ~ 586883 (-)
CI01000069_00564614_00567490 NA coding downstream 207755 563530 ~ 567576 (-)
CI01000069_00516206_00538847 NA coding downstream 235737 516206 ~ 539594 (-)
CI01000069_00486030_00493370 NA coding downstream 281961 485818 ~ 493370 (-)
CI01000069_00411079_00477452 CLEC16A coding downstream 297879 410292 ~ 477452 (-)
CI01000069_00919963_00924163 CUNH16ORF72, C16ORF72, C2H16ORF72, C16ORF72.S, C6H16ORF72, CLG13H16ORF72 coding upstream 144263 919921 ~ 925610 (-)
CI01000069_00952894_00955774 NA coding upstream 176726 952361 ~ 955790 (-)
CI01000069_00983726_00984227 PDE6G coding upstream 207495 983153 ~ 984314 (-)
CI01000069_01023405_01025613 NA coding upstream 247684 1023342 ~ 1026058 (-)
CI01000069_01052717_01076129 ABAT coding upstream 276550 1052208 ~ 1076129 (-)
G273727 NA non-coding downstream 865 774190 ~ 774466 (-)
G273726 NA non-coding downstream 1378 773631 ~ 773953 (-)
G273712 NA non-coding downstream 17758 757368 ~ 757573 (-)
G273558 NA non-coding downstream 195611 519190 ~ 579720 (-)
G273612 NA non-coding downstream 206238 565044 ~ 569093 (-)
G275173 NA non-coding upstream 140826 916484 ~ 952244 (-)
G275234 NA non-coding upstream 189726 965384 ~ 966878 (-)
G275235 NA non-coding upstream 194960 970618 ~ 971686 (-)
G275175 NA non-coding upstream 224265 999923 ~ 1002774 (-)
G275169 NA non-coding upstream 239180 1014838 ~ 1019446 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 728117 43906 ~ 52896 (-)
G275178 NA other upstream 151265 926923 ~ 945804 (-)
CI01000069_01645966_01647142 NA other upstream 870110 1644522 ~ 1647326 (-)
CI01000069_02589498_02621318 SYT3 other upstream 1835517 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 2213368 2997275 ~ 3008924 (-)

Expression


Co-expression Network