G275184


Basic Information

Item Value
gene id G275184
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1237987 ~ 1240609 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU312221
AATAACCTTATAATAACCTTAAAATAACCTAATAATAACCTTGCTGACAACTGCCCAACTCCTAACCAATGTGGTTTCTATGAGACAATATAAAAATAAGAACATTTTTTTAAAAATTTAAATAGAATACAAAAAGAAATAAAAACTAGTAAAATATTCAAAGCTATAATAGCCCTTGTTCTTGTGCATGTAGATGGATTTATAGTTGTGTTTGTCATTATACAGTTGACTCAGATTTGTAAAGCAGGACCTGTGGTCAGGCCAGTGTTTGGCCACAGAGAGTAGGAGCAGGCGGTCAGGCAGTGTCAGAGAGGGAAGGATGGGGGGGGGTAGTGGGGGCGGATGGGGACATGAGCCCGGCAGGTCGGCACAGATGATGGGTCCAGATGGAGAGGTACTGGGCAGTGCCAGGGGCGGAGGAACCACGAGGAGGGTCCACTGCTCCACAGGCAGCACAGGGCCGCTCTTTCCGTTCACGCCAGCTTGCACATTACCAGGCCCTTTGCTCTGAACTCAATTCGGCACCCGTATTGCACATGGTCTATACCAGATCTTTGAAGGACGCACGGCTAAGGACACACAGGGAATGATGAAGAATTACTCGTTGACAGAGAAATAAGTGTGCCAAGCCATGAACAGTAGATAAAGGGTGGTTTTAGTTAAAACGTCTGTTAATTACTGGTAATGGCTGAATAATCACAAGCCAGCTAATTATACGCAGAACAAAAGCCGATGTTTATGAATAAGCAACTTTTGCTGGATATATCAGCAGTAGGGGTGCAACGGTTCAAATTGTTCACGGTTCGGTTCATATCACGGTTTTAGGGTCACGGTTTCGGTACGTTTCGGTATGTGCTATGTTCAGGGAAAATAGAACTACTGTCAAATAAAAATAAAGAAAATAAGAACAAATAATCAAACTACAAACAACATCAGAAATAAATACAATAGAGCAAATATTCAAATAAAATAAACAGTGCTTTTCAGGTTTTTTAGGTATCTAACAGTACTTTTCAGGTACAGAAAATGGATAAAATAATCAAATATAAAATAACACTGCATATTATCTTCACTGTATGAATTAAATAAAGATTAATCATTGTTGAAGTTACAAAAGCTATTCAGTCAAGAGCAGTGAGTGATTTCTTTGTCATTTGTTGTTTGATTTTACATTAAAAACACAGGGAGCTGGAATAGTTTTTTTCCCCTTTAAGACATGCACGATCCAGTACATATACCGTTACACATGCGTTGTCTTTCTCGACTATTATACGTTCACTTAAAACATAACCAACTATGTTTGCTAGGACACTCACCAAGACGGGCATGTTGACATAATTTTTCTATGAATTTGTCCACTGAAGCGCAAGACTTGAAAGAGAACTCTGTATTTGTCTGAAATAAGCGTGTGTGCGCCTCGGATGAGCGCACACAAATCTTCTCACAGCGCGCGAGTTCTCTTTTGCGTCTTGCACTCGAATGTTTAAATTAGCAAGGCTTAAATGAGTTTAGTTTAAACACAGGTAGCAACGTGTGCTGTTCAGGTCTCACCTGCGCTCGCGCGCTGTCAACACCCGGGTGATGACGGCGTAAATGATCGCATTGAACAAAGTTTACAAAGAGTGACTGTTTTGTCCACGCTTTTTGATTATCGATGTTGTAACGTTTTGGGAAGCCAGAATGCACATCCATCGACTGAAACACATTATCTGAACTCTATCTGTCTGTTTTCCACGTTGCTATTTTAAACAAACCATATTAGCCTATAGATGCGTCGTCATTCGAGATGGACCGTGGTGCAAGTGCATGCCGAACCGTAAGTGGAGAACGGTACGGTTCGATTTTTTTCGAAGAACCGTTGCACCCCTAATCAGCAGTGATCAAAAACATTTCTTTGGTGCTGACAAGAACAACATAATATCTAGGACAACCAGTTTACCTTCAGGGAGAGGGTATTTCTTTACCTGCCTTGTACATAAATTATAGGGTGGTGGTCAGCAAGTTATTGTTATTGAAAACGAAAGCTATACCAAAACCGAACAGTGAAAAAGTATATTTTACCTTTTATTATATTAATGTTTTTGTAAAATATAAAATGTTTGTTTCAAAAGTGTATGTGTGTGTGTGTGTGTGTGTATATATATATATGTATGTATATATATATATATATATGTGTATATATATATATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312221 True 2189 lncRNA 0.39 2 1237987 1240609

Neighbor

gene id symbol gene type direction distance location
CI01000069_01155772_01178120 RBFOX1 coding downstream 59867 1155442 ~ 1178120 (-)
CI01000069_01141607_01144384 NA coding downstream 93166 1141470 ~ 1144821 (-)
CI01000069_01085974_01097576 METTL22 coding downstream 140411 1085650 ~ 1097576 (-)
CI01000069_01052717_01076129 ABAT coding downstream 161858 1052208 ~ 1076129 (-)
CI01000069_01023405_01025613 NA coding downstream 211929 1023342 ~ 1026058 (-)
CI01000069_01410825_01412802 NA coding upstream 169978 1410587 ~ 1413155 (-)
CI01000069_01519314_01531186 FBXL16 coding upstream 278592 1519201 ~ 1531586 (-)
CI01000069_01571371_01593400 GSG1L coding upstream 330762 1571371 ~ 1593400 (-)
CI01000069_01632361_01633951 NA coding upstream 391615 1632224 ~ 1633951 (-)
CI01000069_01645966_01647142 NA coding upstream 403913 1644522 ~ 1647326 (-)
G275179 NA non-coding downstream 113690 1120362 ~ 1124297 (-)
G275198 NA non-coding downstream 206009 1027973 ~ 1031978 (-)
G275169 NA non-coding downstream 218541 1014838 ~ 1019446 (-)
G275175 NA non-coding downstream 235213 999923 ~ 1002774 (-)
G275182 NA non-coding upstream 32831 1273440 ~ 1306881 (-)
G275191 NA non-coding upstream 42882 1283491 ~ 1299129 (-)
G275189 NA non-coding upstream 102827 1343436 ~ 1349224 (-)
G275188 NA non-coding upstream 130447 1371056 ~ 1381154 (-)
G275195 NA non-coding upstream 151214 1391823 ~ 1395183 (-)
CI01000069_00952894_00955774 NA other downstream 282197 952361 ~ 955790 (-)
G275178 NA other downstream 292183 926923 ~ 945804 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 1190773 43906 ~ 52896 (-)
CI01000069_02589498_02621318 SYT3 other upstream 1370566 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 1748417 2997275 ~ 3008924 (-)
G275699 NA other upstream 1751895 2992504 ~ 3078168 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 2172364 3412973 ~ 3417644 (-)

Expression


Co-expression Network