G275195


Basic Information

Item Value
gene id G275195
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1391823 ~ 1395183 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU312232
TTAAATGTGTATATATTTTCATAGTTAACAATAAGGTTTATATTTTCATACTTATGTATGAAATATTGTACCATATTCATACTATGTATTTCCAAAAGCTTGTTTACAGTAAAATTACATATATTGTACTGCTTTTAAATAAAGTTGTTGCTTTTTACTTTTATTTTTTCTGTAAGCATATTTGGTCACACTTTAGATTAGGGTCCAATTCTCACTATTAACTAACTAAAAACTGTGACTTTTGCCTCACTCCTAATAACTGCTTAATAATATTTGGTAAGTTAGTTAAGTTTAGGTATTGGGTAGGGTCAAGGGATGTAGAATATGGTCATGCAGAATAAGGCATTAATATGTGCTTTATAAGTACTAATAAACAGTCAAAATCCTAGTAATATGCACGCTAATAATAAGCAACTAGTTAATAGTGAAAATTGAACCTTAAACTAAAGTGTTTTAGTTAAAGTATTTTTTAAAGTGAACAATTTCTTGTTAATAATAAAGCCTAATTATATATTTTTTTGGCTTTTAGAGCAGCCAAGGCCATTTGAAATCATCAGTACCTAAAACAATGAATAAAAATAACCAGGGGATAAACTGTAACATAACCCAGAAAATATATTTATATTATAATATATATATATATATATATATATGTATTTGTAATAGTATGGAAGAAACTATACCGCTTACATTTCCCTGCCAGTTTAAAAAATCTACAGGCAACTGTCTCAGGTTCTCTTGTATACCTCAGTGTTGTTCTTGGTGACTTCAGGAATCAAAGCGTCTCATTTTTGTGTTCTGAAATTAAAGACCTGTAATGTAATTATAAATGGATGCATAATATGAGTAGGAACATCGGGAATGTAACGTGAAGTCTATTTTTAGACATTGTTTCATACCCACCATGTACCTTTTAACATATGCCTGTCGCCCTGAAGGAGACATCACAGAACAGCCCCCTCCTTTCCATTTGCTCTCCTTAATGCAATACGTGTTAGGCATCAGTATTCGGTTTTTGGCATGTACAGCTCGCTCTCGTGATCTGCCGTAATAGAGGGGGTTTGTGGCACCGCTAAGCACGCTAGATGCGGCGGTTTTCATAAATAAGCTGCGTGCTGTTTAAAGAGCAGCTCTAGGTTGCTTTGCCTCTCATTACTGCTCACGTTTTAAATGGGGTTTAGGATGAAATTCTGTCTGCTTAACCCCAACGAAATTACGAACACTTTACTAGAAAGACGTCAGGGAGATAAAACGGTCCTTGGGAAATGGCAAGCAATTAAAAGTATATTAGCTGTTCAAGGCCAAAAATAATTAAAGCTCTCAGACCATTGTGTTTTAGAAAATAGCTGCAGGCAGCAATCATAAGAGGTGCGCACTGAGTCAGAAGTCACCGAATACATGAAATGTTCTGCCACGGCCCGGCTACAGTACAGCCAAAAATAAGCAGCCATCAAAGCTTCCCTTTTGATTTGGTGCTTCTCATTTTCTGCGTAATGCCATTTTTTCCACTGTGCTTCACGCAAGCGTATCACATTACAGCATTTAGAAATGAGATTGGATCTGCGTATTTAATCACACCAATGCAATTAGTTGGTAGGAACAGAATGAACAGAATTGGAACACGTCAGAATGCTCCCCCCTGTTGCTGCTTATATGGATCCGGGTGCGCAGAGACCCCCAGAAAACATTAAATTGCAGGCAGTAGGACTTCAATCCAAGGACAAAACAAGAACAACAAAAACTGATATTGTAGTGAAATTAAAGGATCTTTCCTGGGCATTGTGCAGTCCAATAGACGTGACCTCAGAGATGGCGCGAGGATGTGCTGCAGTGCGCTCTAGTACTCGGGTTTAAACTCACATACGTTCACGTGTTGGCCTTGTGTCAGCCGGTGACTGTGGTCCATCACGCTTCTAGACAAATCTCTGTGGGCTCGATGTGCTCAGAGGCAGTTCTTTCCACTTTAACCGGATTTGCGCAGATGAGACGAGTGCTCACCAAGCACCACAGAAACATTATATGCCCCCTCCGGGATATTGGATAGATGCAACTTTTATCTCTTTTCTAATCATATCCTAGCTGTTGTTTGTTTGTCATTGCTGTGCAGTGTCATTGATGGTGGTTAATATCAAATGAGAAAATGAGATTTTATATCTCTTTCAGATATGCTGTCATTTAGTTTCATGTTAATGTCACATTTAAAGTAGATTTGGTGTGGAGTTGTCTAAGGAAATATGCAATGCCTGATTGATGAGCATGCATTTATTTGTTCATAAACAAAGTGGGAAGCTCCTGATGTGTTTGTAGCAAATTTTAGTCTTTAAAGTCGTGATGAAACGGAAGTAGAGACAGATCTTTTTTTCTGTATTGCGACATACATCTGTGTGAAACGGATTATCAAAAAAAAAATAAATAAAAAAAAAAATGTAGAAGTGCCCTATTTTTGTATTTATAAAATAGGGTGCATTTTGATTTTATGCTGACTTTAAAGGGTTAAAATTCACTGCATTGGTTCTTGCAGAATCTCAAACGTGCTGCGTAACACACGAGAATGAACCTTATTGGTTCTTTCATGTCAAGCAAACATGCTTGAGGTTCTGTTTATCATTACTGATGTGCGAGTTGATGAATGTTTATATGTGAATAAAAGCCTAAATTAAATTTGTTCAGCGTATAAAGCAATCGAGTCTCTTTAGAAAATTTGGACTAAAACGCTCAATTCATATGGATTCGTTTTACGATCTCTTTATGGACTTTTTGAAGCGTCATAGTGGTAGATTTTGCCCAGTTTTTTTGTGTAGAAATTGCCCAGATTTCATTAAAATGTCTTCATTTGTGTTTAGAGGATGAATGATAGTCTTAAGGGTGTGGAACGACATGAGGGTGAGTAAATGATGACAGAATTTTCATTTTTGGGTTAACTAACCCTATATGGCAAGTCAGTTCATATGGCAGCCATCTCGATAATGCCCCTATGCAGCTATTTTTTTTAAACCATTACTGCCAGATTTTTATTGCTACAGTATACTTCAAAACTATACTTCAGTATACTAAAACATAATCCTGACAAATTTATTTTGATAGTATATTTCAGGTCAGTGAGAAAGTCTGACAACAATGGTTTCATAAACTGTGTTCTTTTAGCTCAAAAATGGAAAAACTGGTATGTGTATTTAAAAATAAACAAAAAAAAAAAAAGGCGGGACTTCCATTCCTATAGCCATCGTATTGAGCGTTGTAATTTCTCCCATTCATGTTTCTACTTCTCCACCTTAAACTATTGATATATACACTGCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312232 True 3300 lncRNA 0.36 2 1391823 1395183

Neighbor

gene id symbol gene type direction distance location
CI01000069_01155772_01178120 RBFOX1 coding downstream 213703 1155442 ~ 1178120 (-)
CI01000069_01141607_01144384 NA coding downstream 247002 1141470 ~ 1144821 (-)
CI01000069_01085974_01097576 METTL22 coding downstream 294247 1085650 ~ 1097576 (-)
CI01000069_01052717_01076129 ABAT coding downstream 315694 1052208 ~ 1076129 (-)
CI01000069_01023405_01025613 NA coding downstream 365765 1023342 ~ 1026058 (-)
CI01000069_01410825_01412802 NA coding upstream 15404 1410587 ~ 1413155 (-)
CI01000069_01519314_01531186 FBXL16 coding upstream 124018 1519201 ~ 1531586 (-)
CI01000069_01571371_01593400 GSG1L coding upstream 176188 1571371 ~ 1593400 (-)
CI01000069_01632361_01633951 NA coding upstream 237041 1632224 ~ 1633951 (-)
CI01000069_01645966_01647142 NA coding upstream 249339 1644522 ~ 1647326 (-)
G275188 NA non-coding downstream 10669 1371056 ~ 1381154 (-)
G275189 NA non-coding downstream 42599 1343436 ~ 1349224 (-)
G275182 NA non-coding downstream 84942 1273440 ~ 1306881 (-)
G275191 NA non-coding downstream 92694 1283491 ~ 1299129 (-)
G275184 NA non-coding downstream 151214 1237987 ~ 1240609 (-)
G275276 NA non-coding upstream 25228 1420411 ~ 1420848 (-)
G275284 NA non-coding upstream 55227 1450410 ~ 1450722 (-)
G275286 NA non-coding upstream 57943 1453126 ~ 1453361 (-)
G275187 NA non-coding upstream 59270 1454453 ~ 1455732 (-)
G275288 NA non-coding upstream 64601 1459784 ~ 1460061 (-)
CI01000069_00952894_00955774 NA other downstream 436033 952361 ~ 955790 (-)
G275178 NA other downstream 446019 926923 ~ 945804 (-)
CI01000069_00044853_00051264 YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC other downstream 1344609 43906 ~ 52896 (-)
CI01000069_02589498_02621318 SYT3 other upstream 1215992 2589469 ~ 2621641 (-)
CI01000069_02997434_03008924 NA other upstream 1593843 2997275 ~ 3008924 (-)
G275699 NA other upstream 1597321 2992504 ~ 3078168 (-)
CI01000069_03415853_03417644 LIMD2 other upstream 2017790 3412973 ~ 3417644 (-)

Expression


Co-expression Network