Gene
RNA
| Item | Value |
|---|---|
| gene id | G275289 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000069 |
| NCBI id | null |
| chromosome length | 5329268 |
| location | 1462796 ~ 1463027 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| PREDICTED: DNA-binding protein SATB2-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU312339 | True | 232 | lncRNA | 0.34 | 1 | 1462796 | 1463027 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000069_01410825_01412802 | NA | coding | downstream | 49641 | 1410587 ~ 1413155 (-) |
| CI01000069_01155772_01178120 | RBFOX1 | coding | downstream | 284676 | 1155442 ~ 1178120 (-) |
| CI01000069_01141607_01144384 | NA | coding | downstream | 317975 | 1141470 ~ 1144821 (-) |
| CI01000069_01085974_01097576 | METTL22 | coding | downstream | 365220 | 1085650 ~ 1097576 (-) |
| CI01000069_01052717_01076129 | ABAT | coding | downstream | 386667 | 1052208 ~ 1076129 (-) |
| CI01000069_01519314_01531186 | FBXL16 | coding | upstream | 56174 | 1519201 ~ 1531586 (-) |
| CI01000069_01571371_01593400 | GSG1L | coding | upstream | 108344 | 1571371 ~ 1593400 (-) |
| CI01000069_01632361_01633951 | NA | coding | upstream | 169197 | 1632224 ~ 1633951 (-) |
| CI01000069_01645966_01647142 | NA | coding | upstream | 181495 | 1644522 ~ 1647326 (-) |
| CI01000069_01653730_01654507 | EEF2KMT | coding | upstream | 190679 | 1653706 ~ 1654507 (-) |
| G275288 | NA | non-coding | downstream | 2735 | 1459784 ~ 1460061 (-) |
| G275187 | NA | non-coding | downstream | 7064 | 1454453 ~ 1455732 (-) |
| G275286 | NA | non-coding | downstream | 9435 | 1453126 ~ 1453361 (-) |
| G275284 | NA | non-coding | downstream | 12074 | 1450410 ~ 1450722 (-) |
| G275276 | NA | non-coding | downstream | 41948 | 1420411 ~ 1420848 (-) |
| G275290 | NA | non-coding | upstream | 4892 | 1467919 ~ 1468137 (-) |
| G275291 | NA | non-coding | upstream | 7008 | 1470035 ~ 1470297 (-) |
| G275292 | NA | non-coding | upstream | 8713 | 1471740 ~ 1471941 (-) |
| G275293 | NA | non-coding | upstream | 9078 | 1472105 ~ 1472537 (-) |
| G275294 | NA | non-coding | upstream | 11972 | 1474999 ~ 1475222 (-) |
| CI01000069_00952894_00955774 | NA | other | downstream | 507006 | 952361 ~ 955790 (-) |
| G275178 | NA | other | downstream | 516992 | 926923 ~ 945804 (-) |
| CI01000069_00044853_00051264 | YPEL1, YPEL3, YPEL2, YPELD, YPELA, YPELC | other | downstream | 1415582 | 43906 ~ 52896 (-) |
| CI01000069_02589498_02621318 | SYT3 | other | upstream | 1148148 | 2589469 ~ 2621641 (-) |
| CI01000069_02997434_03008924 | NA | other | upstream | 1525999 | 2997275 ~ 3008924 (-) |
| G275699 | NA | other | upstream | 1529477 | 2992504 ~ 3078168 (-) |
| CI01000069_03415853_03417644 | LIMD2 | other | upstream | 1949946 | 3412973 ~ 3417644 (-) |
