G274039


Basic Information

Item Value
gene id G274039
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1552778 ~ 1553108 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310916
TATTACGCTTTTTTCGGCTAAGTTTGCAGGTTTGCCTTCGAGTGGCTTTGCTTTAATAAAATTGATGGTTTATAAAATGGATAGTTCCCGTCCTTGATTCTGGTTGGTTGAACTGCATTCAAAGACATTGTAAATTACTCTACAAACATACACCTGTGACCTCATTACGTCAGTATTACTGCGCCTCTGTGTTGCTGCAGTTTAATGTATTATCTATTTCAGCTAAAGTAATTGCTATTTATGTAATGAAGTATAATGAGTGACCCTGGCGTTATGTTGCATCATTCACCTTTAATTTTGAGACCACGCCCTTCCCCCCATCCATAAACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310916 True 331 lncRNA 0.38 1 1552778 1553108

Neighbor

gene id symbol gene type direction distance location
CI01000069_01454390_01514188 SEPT12 coding upstream 38590 1454390 ~ 1514188 (+)
CI01000069_01340581_01345512 NA coding upstream 206823 1340168 ~ 1345955 (+)
CI01000069_01099046_01114142 TMEM114 coding upstream 438374 1099046 ~ 1114404 (+)
CI01000069_01047561_01050241 NA coding upstream 502438 1047495 ~ 1050340 (+)
CI01000069_01027083_01031960 NAT15, NAA60 coding upstream 519997 1027083 ~ 1032781 (+)
CI01000069_01634504_01643721 FLR, TTC30A, TTC30A.S coding downstream 81076 1634184 ~ 1644078 (+)
CI01000069_01649266_01653494 ALG1 coding downstream 96158 1649266 ~ 1653697 (+)
CI01000069_01661474_01662461 NA coding downstream 108366 1661474 ~ 1662831 (+)
CI01000069_01742287_01864795 CACNA1I coding downstream 189179 1742287 ~ 1864795 (+)
CI01000069_01916183_01920282 NA coding downstream 363075 1916183 ~ 1920352 (+)
G273766 NA non-coding upstream 10943 1517658 ~ 1541835 (+)
G274005 NA non-coding upstream 138398 1414004 ~ 1414380 (+)
G273955 NA non-coding upstream 206055 1346377 ~ 1346723 (+)
G273848 NA non-coding upstream 374667 1148464 ~ 1178111 (+)
G273850 NA non-coding upstream 432698 1119376 ~ 1120080 (+)
G274041 NA non-coding downstream 7506 1560614 ~ 1560980 (+)
G273769 NA non-coding downstream 17096 1570204 ~ 1582390 (+)
G273774 NA non-coding downstream 153587 1706695 ~ 1728531 (+)
G273768 NA non-coding downstream 191245 1744353 ~ 1766411 (+)
G273765 NA non-coding downstream 356842 1909950 ~ 1911444 (+)
G273359 NA other upstream 1073697 477727 ~ 479081 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other downstream 480292 2031954 ~ 2040427 (+)
G274270 NA other downstream 1119516 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 1339738 2893418 ~ 2894947 (+)
G274603 NA other downstream 2246915 3800023 ~ 3803501 (+)

Expression


Co-expression Network