G274088


Basic Information

Item Value
gene id G274088
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 1922135 ~ 1922496 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU310971
TATTCTCTATTTATGGATATGACGAGACATGCACAGGCGAGTGACGTATGTACGCAATTTCCCGCGAAACCATTCACCCGGTCTAAAATATAAAAACTTATGCCGCGTTCCAGGCAACCCGTAACCCGTGTTTTTTCAGCCTTCTACCCATGAAAGTGCACTGGAACGGCAGTCAAACCCATGACTTCGCACCGTGAACTCGTACTAGATCTATGTACTCCCAGTTCCGCGCTCTGACATCACATAGCCCGCGAAACAACAATGGCAGCCCCTATGGATGCGGTGTTTATGCAAGTGCACGGTAAAATAACGTAAAGTAAAAGGTATAACAGCTCCTCTTGCCTTATGCACCATTGTTCCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU310971 True 362 lncRNA 0.47 1 1922135 1922496

Neighbor

gene id symbol gene type direction distance location
CI01000069_01916183_01920282 NA coding upstream 1783 1916183 ~ 1920352 (+)
CI01000069_01742287_01864795 CACNA1I coding upstream 57340 1742287 ~ 1864795 (+)
CI01000069_01661474_01662461 NA coding upstream 259304 1661474 ~ 1662831 (+)
CI01000069_01649266_01653494 ALG1 coding upstream 268438 1649266 ~ 1653697 (+)
CI01000069_01634504_01643721 FLR, TTC30A, TTC30A.S coding upstream 278057 1634184 ~ 1644078 (+)
CI01000069_01945534_01950027 GRAP2A coding downstream 23038 1945534 ~ 1950622 (+)
CI01000069_01951110_01962486 FAM83FA coding downstream 28614 1951110 ~ 1963053 (+)
CI01000069_01974435_01988436 RAC2 coding downstream 51095 1973591 ~ 1988719 (+)
CI01000069_02013637_02015088 SSTR3 coding downstream 91141 2013637 ~ 2016746 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D coding downstream 109458 2031954 ~ 2040427 (+)
G273765 NA non-coding upstream 10691 1909950 ~ 1911444 (+)
G273768 NA non-coding upstream 155724 1744353 ~ 1766411 (+)
G273774 NA non-coding upstream 193604 1706695 ~ 1728531 (+)
G273769 NA non-coding upstream 339745 1570204 ~ 1582390 (+)
G274041 NA non-coding upstream 361155 1560614 ~ 1560980 (+)
G274103 NA non-coding downstream 69641 1992137 ~ 1993190 (+)
G274118 NA non-coding downstream 97382 2019878 ~ 2020085 (+)
G274148 NA non-coding downstream 349564 2272060 ~ 2272789 (+)
G274152 NA non-coding downstream 353348 2275844 ~ 2276087 (+)
G273359 NA other upstream 1443054 477727 ~ 479081 (+)
G274270 NA other downstream 750128 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 970350 2893418 ~ 2894947 (+)
G274603 NA other downstream 1877527 3800023 ~ 3803501 (+)

Expression


Co-expression Network