G274156


Basic Information

Item Value
gene id G274156
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2363135 ~ 2364601 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311054
TTTATTAAATGAAAGAAATAAAACACTGCCATAAAATAATTTGGATTTTATATTACATTAACAAAAATGCAGATTCATTGCACATTGCTGTATCTTAATATGTTTGGATTACAGGTCTGCGCTCGTCTCAGTCTGTAAGAAACCTCATATCAGAAAGCTTTGTTTTACTGACATAATCTGAACCACAGAAAAGAACCACATTATTCCATTGAGTCTAGAAAGATACCAACAAGTAAACAAGGCTATAAACTTTGAAACCAGGGCAGAGGTAACAATATTTAAGGGGAAAACCCTGACTACCACCAAACTAAACCACACATCCACTATTAATATGCCATTCTTTCGAAGGGAACATGCGAGCGCTCTATATTGATGCCAGTGTATTGGGGATTTGAGCATATTTGGTTGTGGATGAAGCAGAAAACACCATTGGTAATTTGGCCTGGTTATGTTATGCCAAGTTTCAGATTAGGATAGGTCAAGTAGGTTTGTATGTGTATGTGCAATGTATAATTAAAAGGCCATTTCTAGATAAGTTCAAATCAGGTAGAATTGTGTCTGTGTGTGTCTGTGTGTGGTGTTAGGAGGTGTGCTGAGGCAGATTCTGTGGTGGCTCAGCTGGCAGGTTATTCTTAACATCTCCATTCTGATCGGCTGGTACTTTTACCACTAAAAAACAAAACAGGCAATGTTTACTGTCCTAAAACATTTATCCCGAAAGGGTTAATAGAATCAATTTTTATAAAATTATATTAGGTTAACCAAAGGCTGAATCAATTTAATTCTTCTCACCTTGACTGTCTTCATTTGCTAGTTTCTGGATCTCCTGTTGAAACTGGAGCTCTCCATTAGGACCTGAGGGAGGCTGTCTATTCACTGCCTGTTGCTCCTTTTGTTTTTGTGACATCTCCATTACTGCCTGCTGATATTCTCGTTTCTGCACTTCTAGAGCTTTGCTTCTCTCTTTGAGAAGTTCCTGCTCCTGTCGTAATTTCTCCGCTCTTCTGCCAAGCTCCACCTCCTTATCCCGGAGTTCTGCCTCAAAGCGCTGCAGCTCCTCTTCTGTGTACACTGGCTTTGTATCATCCAGTGTCTTAAATGGAGATATAAAGAGTGTAGAAAGGTAATGAGTTAGAACAAAACACTTCCATGTAAAAACAGTATAATAAATCAAGACATACATCTAAATCTGGCTCTAACCTCCCACTCCTTTTGGTCTTTAAACTCCTTCTTCTCTGTAGATTTGAGGAAC
>TU311056
TTTATTAAATGAAAGAAATAAAACACTGCCATAAAATAATTTGGATTTTATATTACATTAACAAAAATGCAGATTCATTGCACATTGCTGTATCTTAATATGTTTGGATTACAGGTCTGCGCTCGTCTCAGTCTGTAAGAAACCTCATATCAGAAAGCTTTGTTTTACTGACATAATCTGAACCACAGAAAAGAACCACATTATTCCATTGAGTCTAGAAAGATACCAACAAGTAAACAAGGCTATAAACTTTGAAACCAGGGCAGAGGTAACAATATTTAAGGGGAAAACCCTGACTACCACCAAACTAAACCACACATCCACTATTAATATGCCATTCTTTCGAAGGGAACATGCGAGCGCTCTATATTGATGCCAGTGTATTGGGGATTTGAGCATATTTGGTTGTGGATGAAGCAGAAAACACCATTGGTAATTTGGCCTGGTTATGTTATGCCAAGTTTCAGATTAGGATAGGTCAAGTAGGTTTGTATGTGTATGTGCAATGTATAATTAAAAGGCCATTTCTAGATAAGTTCAAATCAGGTAGAATTGTGTCTGTGTGTGTCTGTGTGTGGTGTTAGGAGGTGTGCTGAGGCAGATTCTGTGGTGGCTCAGCTGGCAGGTTATTCTTAACATCTCCATTCTGATCGGCTGGTACTTTTACCACTTGACTGTCTTCATTTGCTAGTTTCTGGATCTCCTGTTGAAACTGGAGCTCTCCATTAGGACCTGAGGGAGGCTGTCTATTCACTGCCTGTTGCTCCTTTTGTTTTTGTGACATCTCCATTACTGCCTGATTAGAAATAAAACAAGCTCTCAGCTCTCTGGCATCAAACATATATGCCAAAAATTACAATAATATGCAGTACTGATGTTGTAAATGTACTAAAATCATTTGTTTTAGTATGGTATGGCAGGGCTCAACATAAGTTTTCTATTATTTTAAAATGATAGAAAACTCCACGAAAAGGGTTGCAACAGAAAACCAATTGTTTAAGTGTCTTCTACCTGCTGATATTCTCGTTTCTGCACTTCTAGAGCTTTGCTTCTCTCTTTGAGAAGTTCCTGCTCCTGTCGTAATTTCTCCGCTCTTCTGCCAAGCTCCACCTCCTTATCCCGGAGTTCTGCCTCAAAGCGCTGCAGCTCCTCTTCTGTGTACACTGGCTTTGTATCATCCAGTGTCTCCCACTCCTTTTGGTCTTTAAACTCCTTCTTCTCTGTAGATTTGAGGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311054 False 1252 lncRNA 0.39 2 2363135 2364601
TU311056 True 1237 lncRNA 0.39 3 2363135 2364601

Neighbor

gene id symbol gene type direction distance location
CI01000069_02311794_02313206 NA coding upstream 48125 2311794 ~ 2315010 (+)
CI01000069_02256234_02263001 NA coding upstream 100014 2256169 ~ 2263121 (+)
CI01000069_02228111_02232088 IFI35 coding upstream 131039 2228111 ~ 2232096 (+)
CI01000069_02065642_02154533 CACNG2B, CACNG2, CACNG2A coding upstream 208602 2065642 ~ 2154533 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D coding upstream 322708 2031954 ~ 2040427 (+)
CI01000069_02393010_02396796 AKT1S1 coding downstream 28409 2393010 ~ 2397732 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding downstream 89987 2454588 ~ 2465681 (+)
CI01000069_02466489_02467309 NA coding downstream 101179 2465780 ~ 2467397 (+)
CI01000069_02540591_02547912 NA coding downstream 175909 2540510 ~ 2548022 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 453639 2818240 ~ 2821937 (+)
G274165 NA non-coding upstream 498 2361371 ~ 2362637 (+)
G274193 NA non-coding upstream 2591 2360311 ~ 2360544 (+)
G274192 NA non-coding upstream 3989 2358931 ~ 2359146 (+)
G274176 NA non-coding upstream 69968 2292957 ~ 2293167 (+)
G274152 NA non-coding upstream 87048 2275844 ~ 2276087 (+)
G274197 NA non-coding downstream 9384 2373985 ~ 2374318 (+)
G274206 NA non-coding downstream 47231 2411832 ~ 2412196 (+)
G274207 NA non-coding downstream 47664 2412265 ~ 2423194 (+)
G274215 NA non-coding downstream 104553 2469154 ~ 2469376 (+)
G274225 NA non-coding downstream 122368 2486969 ~ 2487307 (+)
G273359 NA other upstream 1884054 477727 ~ 479081 (+)
G274270 NA other downstream 308023 2672624 ~ 2681158 (+)
CI01000069_02894136_02894807 COX6A2 other downstream 528245 2893418 ~ 2894947 (+)
G274603 NA other downstream 1435422 3800023 ~ 3803501 (+)
G274619 NA other downstream 1764527 4129128 ~ 4133378 (+)

Expression


Co-expression Network