G274361


Basic Information

Item Value
gene id G274361
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2738433 ~ 2738661 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311278
CTTTTTAATTGAATACAATTATCAGCAATCATCAAGAATTTGACTGAAAAGTTGAATTGCTGTTTTTATGTCTAATTTATGCCATGTATTCTAACGTAGATTCCCAAAGTCCGTGTCTGCCATCACCTTAACTGAGTTTTCATTAGAAGCCCTGTTTTACCTCAGAAAGATAGGAAGCAATTGAAGCACTGAACAAGACATCATTGCCTGCCCGCCACCAGGGTTATTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311278 True 229 lncRNA 0.38 1 2738433 2738661

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 190411 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 271036 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 272752 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 340701 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 423423 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 79579 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 117761 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 122993 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 154757 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 165322 2903983 ~ 2905654 (+)
G274360 NA non-coding upstream 896 2737163 ~ 2737537 (+)
G274359 NA non-coding upstream 1283 2736542 ~ 2737150 (+)
G274358 NA non-coding upstream 1950 2736145 ~ 2736483 (+)
G274357 NA non-coding upstream 2566 2735580 ~ 2735867 (+)
G274302 NA non-coding upstream 5561 2732374 ~ 2732872 (+)
G274362 NA non-coding downstream 311 2738972 ~ 2739306 (+)
G274363 NA non-coding downstream 785 2739446 ~ 2739662 (+)
G274364 NA non-coding downstream 1145 2739806 ~ 2740019 (+)
G274365 NA non-coding downstream 1385 2740046 ~ 2740313 (+)
G274366 NA non-coding downstream 3089 2741750 ~ 2742013 (+)
G274270 NA other upstream 57275 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 566240 2031954 ~ 2040427 (+)
G273359 NA other upstream 2259352 477727 ~ 479081 (+)
G274603 NA other downstream 1061362 3800023 ~ 3803501 (+)
G274619 NA other downstream 1390467 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1816648 4555269 ~ 4558480 (+)

Expression


Co-expression Network