G274371


Basic Information

Item Value
gene id G274371
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2747065 ~ 2747497 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311288
CTTTTTCTCAATTTCTTTTTTATAGTGTTGAGACTTTGAGAAATAGCAGTTATTTACACCAAAATTCATAGAAATTTCAGTCTGTGTAAGCCTTAAACTTGTTTGCTGGTCTCCCAGCTGTCGGCTGGTTTTAGAGAACTTTTGGGAACTTTTCAGTTGATCAGGCTGGGAGACCAGCTTAAACTAGCTTATAGTGATTGTTACGCCCCTGGACACACCTGTCAGTCATCAGCCCTTGAAGTTTATCTTTATTCACCAACTGCAATAGTCATATGTACAGGACAACCAACTGGTCATCTCTCACCGTCAGGACCACCTGTGAGTTTTCATCTGGAAAATCCGAATAGTCCTTCTGCCATCCCTAAAATGGCTTTTCTGTTTTATCGCTGAACACTCTCAGGTGTTCTGCCCTCTCTCTCTCTCACACTCTCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311288 True 433 lncRNA 0.42 1 2747065 2747497

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 199043 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 279668 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 281384 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 349333 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 432055 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 70743 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 108925 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 114157 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 145921 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 156486 2903983 ~ 2905654 (+)
G274370 NA non-coding upstream 529 2746192 ~ 2746536 (+)
G274369 NA non-coding upstream 889 2745908 ~ 2746176 (+)
G274368 NA non-coding upstream 1808 2744966 ~ 2745257 (+)
G274367 NA non-coding upstream 4313 2742300 ~ 2742752 (+)
G274366 NA non-coding upstream 5052 2741750 ~ 2742013 (+)
G274372 NA non-coding downstream 780 2748277 ~ 2748497 (+)
G274373 NA non-coding downstream 2452 2749949 ~ 2750352 (+)
G274374 NA non-coding downstream 6095 2753592 ~ 2753791 (+)
G274375 NA non-coding downstream 7110 2754607 ~ 2755739 (+)
G274376 NA non-coding downstream 8579 2756076 ~ 2756328 (+)
G274270 NA other upstream 65907 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 574872 2031954 ~ 2040427 (+)
G273359 NA other upstream 2267984 477727 ~ 479081 (+)
G274603 NA other downstream 1052526 3800023 ~ 3803501 (+)
G274619 NA other downstream 1381631 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1807812 4555269 ~ 4558480 (+)

Expression


Co-expression Network