G274374


Basic Information

Item Value
gene id G274374
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2753592 ~ 2753791 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311291
GTTGTGTATTTGCCGACTCCCTGTCTTTTTTTCATACTGCTATATTTTAACAATTTTTGGAGTATTTGATCTACAAATAAATGTGTTTGAGAGTTTTAAAAAAACAAAACTGAAAATTCCTGTCTGGCTGCAATTGGTTTTGTAAGGAAAACGCAACTGACACAATTCAGAGTCCAAATAGATTTTACCACAAACTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311291 True 200 lncRNA 0.32 1 2753592 2753791

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 205570 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 286195 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 287911 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 355860 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 438582 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 64449 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 102631 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 107863 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 139627 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 150192 2903983 ~ 2905654 (+)
G274373 NA non-coding upstream 3240 2749949 ~ 2750352 (+)
G274372 NA non-coding upstream 5095 2748277 ~ 2748497 (+)
G274371 NA non-coding upstream 6095 2747065 ~ 2747497 (+)
G274370 NA non-coding upstream 7056 2746192 ~ 2746536 (+)
G274369 NA non-coding upstream 7416 2745908 ~ 2746176 (+)
G274375 NA non-coding downstream 816 2754607 ~ 2755739 (+)
G274376 NA non-coding downstream 2285 2756076 ~ 2756328 (+)
G274377 NA non-coding downstream 2728 2756519 ~ 2756772 (+)
G274378 NA non-coding downstream 4978 2758769 ~ 2759105 (+)
G274379 NA non-coding downstream 8341 2762132 ~ 2763524 (+)
G274270 NA other upstream 72434 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 581399 2031954 ~ 2040427 (+)
G273359 NA other upstream 2274511 477727 ~ 479081 (+)
G274603 NA other downstream 1046232 3800023 ~ 3803501 (+)
G274619 NA other downstream 1375337 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1801518 4555269 ~ 4558480 (+)

Expression


Co-expression Network