G274380


Basic Information

Item Value
gene id G274380
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2763647 ~ 2764017 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311297
CATGTAGGCAGCTGCACTATTAAAAAAAATGCAGTTTAACTGCACAATGGCTGCTAAAAATGACAACAAAGCCAGCAAAGATTGCAGTTCAGTCTCCATTTCATTGTTTACACGGTCATCAAGGATACGCAGAGCGAACATGGGCAGCCACGGCATCATTTTCAGAAGTCTCCGTTTTGGTCCATTTATACTGAAAATCAACCCCGGTGTTTACAAACTAAAACGGGGTCAGCAGCATTTTCGAAAGTCTCCGTTTTCGAGGTTCAAAAACACCGACGTAGTGTAAAAGACAGGCGTAACTGTAGCAAAACGTATGCATTTTTTTAAAAACAAAAACGCACTAGTGTAAACGGGGCCTTAGAAGGCCCAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311297 True 371 lncRNA 0.42 1 2763647 2764017

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 215625 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 296250 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 297966 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 365915 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 448637 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 54223 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 92405 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 97637 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 129401 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 139966 2903983 ~ 2905654 (+)
G274379 NA non-coding upstream 123 2762132 ~ 2763524 (+)
G274378 NA non-coding upstream 4542 2758769 ~ 2759105 (+)
G274377 NA non-coding upstream 6875 2756519 ~ 2756772 (+)
G274376 NA non-coding upstream 7319 2756076 ~ 2756328 (+)
G274375 NA non-coding upstream 7908 2754607 ~ 2755739 (+)
G274381 NA non-coding downstream 241 2764258 ~ 2764483 (+)
G274382 NA non-coding downstream 580 2764597 ~ 2765464 (+)
G274383 NA non-coding downstream 1465 2765482 ~ 2765725 (+)
G274384 NA non-coding downstream 2263 2766280 ~ 2766605 (+)
G274385 NA non-coding downstream 2804 2766821 ~ 2768439 (+)
G274270 NA other upstream 82489 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 591454 2031954 ~ 2040427 (+)
G273359 NA other upstream 2284566 477727 ~ 479081 (+)
G274603 NA other downstream 1036006 3800023 ~ 3803501 (+)
G274619 NA other downstream 1365111 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1791292 4555269 ~ 4558480 (+)

Expression


Co-expression Network