G274385


Basic Information

Item Value
gene id G274385
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2766821 ~ 2768439 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311302
TTTTTAGAAAGACTAAAGTGTTCACACGGCATTTAAAAAATTGTTTTAGTCAGACTGAAAATAATGAACTAATTGTACTTACTGATGCACTGAGCTTGGCAAAGTTCCTTTCAGTGCACCATGAGAATTGTTTTAAAGACTTTAGTCAAATCCTGCTGTACTCATTATTTGTAGAAGACAAAATAACAGAGTTTGGGTGATGCCTCAGAGCAGCGGTGGATCTACTCTGTCCTTGAGCCCACAGGTACGGCTGGCAAAAACCTTGCCATTGTCATGACAATCAGTCATGGGGGAGGAAGAGTCTAAGTTAGCTGTCAGTGATAAAAAGTTACACAAAAGTAAATAATGTAACTTTTAGTAAGAGCAATGTAATATTGTCATGCGTTAGTTTTACAAGTAACTTCCAACAACACTAGTCATCAGCCCATACGCCAAAGAGAGAAACACTCAGGGCAAAAGAGGGAGAAACAGATGGAAAGAAGAAAAGAGGAGAGAGTTTTGGGAGGTGAGAGAGAAAGGACAGAGCTGAAGTAGGCCAGAGCGCAAGGGAGACCGTCTGTCCCAGATCAGTCCTTTATCGCGAGCAGAATGAGAGAGGAAAAACGTGAGCGGAAGTGCGTAAAACGACTGGGCTAAATCCTGAAAGCTTGAACTATCCCCCCAAGAGCCTATCCAGCAAATATTAGCGGAGGGAGAGATTTCACCATCTTCAACTGATGGGCAAACACACTGAGAGGGAGAAGAGGACGAAAGGGCAAGAAAAACTCACTCACTGTACAGGAGGCCGAGAAGTAAAGTGCACAAAGAGAGGACAAAGACGAGGAGGAGTGGTCAGGAAAAGCGTAAAACACAGGATGGATTGGAGAACAAACATAACCTGACATTAGTTGAGTAAAATGAATAGGAATGGAACAGTGAACACCATATCAAGTCTCCACGCTGGCTTAATTTAAACTGATCCACCTGGTATCGATTCAAGCTGGCCAGGTAGCGCCCACTGCCTAGACTCACCAGCTTAGACAGGCAAACGTGTCTTTAGAAAACACTCAGGGTGGAGACGTTTGTTGAATGACATTAACTGATTGCATGTTTTTATCTACTCATTTTATAGGATAGCGCGAGAAGAACATCAGACTACATTCGTCGCAATTGTTGTAGTCATCAGGCTGTCCACACCTTCAGTAGAATTTGTGTGAGTGTGTTATCATTTATCTAAGCCTGTTAAAATGTTTGAGCAGTTACTATGTTAAGATGAGAATATTTCTCATCCACAAGTGTGAGGCAGGAGATCTTTCTGCTAAGCATAATGAGAGAGAAGTGTTTGAACTACAAAGGGAGCGGTAGTACTCTCGCTACCAGCACGTCTGCTAATGAAGACATGGAAGAGGCAACACACAGAAATATGAAGTAAATGGAAAGAAATACTTTCACTCTATACACTAGGGATGGATCAGGAGGGCCGAATGTTCTTGTGGTGGTACTCTCACATACCAGCAGTACTAGTCTCCATTTTATTCAGGATGAATTCATTTAATTATCAAAAGTGACAGTAAAGACTTTTACAATGTTACAAATAATTTCTATTTTAAAGTCGGCATGAAACGGAAGTTCATTGTGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311302 True 1619 lncRNA 0.42 1 2766821 2768439

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 218799 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 299424 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 301140 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 369089 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 451811 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 49801 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 87983 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 93215 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 124979 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 135544 2903983 ~ 2905654 (+)
G274384 NA non-coding upstream 216 2766280 ~ 2766605 (+)
G274383 NA non-coding upstream 1096 2765482 ~ 2765725 (+)
G274382 NA non-coding upstream 1357 2764597 ~ 2765464 (+)
G274381 NA non-coding upstream 2338 2764258 ~ 2764483 (+)
G274380 NA non-coding upstream 2804 2763647 ~ 2764017 (+)
G274386 NA non-coding downstream 1252 2769691 ~ 2769922 (+)
G274387 NA non-coding downstream 1570 2770009 ~ 2770316 (+)
G274388 NA non-coding downstream 3897 2772336 ~ 2773604 (+)
G274390 NA non-coding downstream 7419 2775858 ~ 2776149 (+)
G274391 NA non-coding downstream 8377 2776816 ~ 2777027 (+)
G274270 NA other upstream 85663 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 594628 2031954 ~ 2040427 (+)
G273359 NA other upstream 2287740 477727 ~ 479081 (+)
G274603 NA other downstream 1031584 3800023 ~ 3803501 (+)
G274619 NA other downstream 1360689 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1786870 4555269 ~ 4558480 (+)

Expression


Co-expression Network