G274386


Basic Information

Item Value
gene id G274386
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2769691 ~ 2769922 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311303
AAAAAACATAAAAAAAATAATGATGCGCATGGATAAATCATTTAAAATAAATACTGCAATATTCCATAAAAAAAAGAAAGGTCAATTTTGATTCAATGGTGACTTTATTCATCAAAGAATCCTGAAAAATAAGTATTACAGCTCCTGCCAATATATTAAGAAGCAAATCATCATTTCAGAATGATTTCTGAAGGATCATGTGACACTGAAGACTGCAGTAATGATGCTGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311303 True 232 lncRNA 0.28 1 2769691 2769922

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 221669 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 302294 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 304010 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 371959 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 454681 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 48318 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 86500 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 91732 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 123496 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 134061 2903983 ~ 2905654 (+)
G274385 NA non-coding upstream 1252 2766821 ~ 2768439 (+)
G274384 NA non-coding upstream 3086 2766280 ~ 2766605 (+)
G274383 NA non-coding upstream 3966 2765482 ~ 2765725 (+)
G274382 NA non-coding upstream 4227 2764597 ~ 2765464 (+)
G274381 NA non-coding upstream 5208 2764258 ~ 2764483 (+)
G274387 NA non-coding downstream 87 2770009 ~ 2770316 (+)
G274388 NA non-coding downstream 2414 2772336 ~ 2773604 (+)
G274390 NA non-coding downstream 5936 2775858 ~ 2776149 (+)
G274391 NA non-coding downstream 6894 2776816 ~ 2777027 (+)
G274339 NA non-coding downstream 9634 2779556 ~ 2780284 (+)
G274270 NA other upstream 88533 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 597498 2031954 ~ 2040427 (+)
G273359 NA other upstream 2290610 477727 ~ 479081 (+)
G274603 NA other downstream 1030101 3800023 ~ 3803501 (+)
G274619 NA other downstream 1359206 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1785387 4555269 ~ 4558480 (+)

Expression


Co-expression Network