Gene
RNA
| Item | Value |
|---|---|
| gene id | G274388 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000069 |
| NCBI id | null |
| chromosome length | 5329268 |
| location | 2772336 ~ 2773604 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU311308 | False | 1269 | lncRNA | 0.43 | 1 | 2772336 | 2773604 |
| TU311305 | True | 424 | lncRNA | 0.45 | 1 | 2773181 | 2773604 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000069_02540591_02547912 | NA | coding | upstream | 224314 | 2540510 ~ 2548022 (+) |
| CI01000069_02466489_02467309 | NA | coding | upstream | 304939 | 2465780 ~ 2467397 (+) |
| CI01000069_02454588_02465668 | MYBPC2, MYBPC2A | coding | upstream | 306655 | 2454588 ~ 2465681 (+) |
| CI01000069_02393010_02396796 | AKT1S1 | coding | upstream | 374604 | 2393010 ~ 2397732 (+) |
| CI01000069_02311794_02313206 | NA | coding | upstream | 457326 | 2311794 ~ 2315010 (+) |
| CI01000069_02818349_02821933 | CLDNI | coding | downstream | 44636 | 2818240 ~ 2821937 (+) |
| CI01000069_02857196_02860525 | NA | coding | downstream | 82818 | 2856422 ~ 2860562 (+) |
| CI01000069_02862381_02864927 | PRF1.1 | coding | downstream | 88050 | 2861654 ~ 2864993 (+) |
| CI01000069_02894136_02894807 | COX6A2 | coding | downstream | 119814 | 2893418 ~ 2894947 (+) |
| CI01000069_02903983_02905418 | NA | coding | downstream | 130379 | 2903983 ~ 2905654 (+) |
| G274387 | NA | non-coding | upstream | 2020 | 2770009 ~ 2770316 (+) |
| G274386 | NA | non-coding | upstream | 2414 | 2769691 ~ 2769922 (+) |
| G274385 | NA | non-coding | upstream | 3897 | 2766821 ~ 2768439 (+) |
| G274384 | NA | non-coding | upstream | 5731 | 2766280 ~ 2766605 (+) |
| G274383 | NA | non-coding | upstream | 6611 | 2765482 ~ 2765725 (+) |
| G274390 | NA | non-coding | downstream | 2254 | 2775858 ~ 2776149 (+) |
| G274391 | NA | non-coding | downstream | 3212 | 2776816 ~ 2777027 (+) |
| G274339 | NA | non-coding | downstream | 5952 | 2779556 ~ 2780284 (+) |
| G274342 | NA | non-coding | downstream | 24780 | 2798384 ~ 2800201 (+) |
| G274317 | NA | non-coding | downstream | 31509 | 2805113 ~ 2811452 (+) |
| G274270 | NA | other | upstream | 91178 | 2672624 ~ 2681158 (+) |
| CI01000069_02033431_02040119 | EIF3D.S, EIF3D | other | upstream | 600143 | 2031954 ~ 2040427 (+) |
| G273359 | NA | other | upstream | 2293255 | 477727 ~ 479081 (+) |
| G274603 | NA | other | downstream | 1026419 | 3800023 ~ 3803501 (+) |
| G274619 | NA | other | downstream | 1355524 | 4129128 ~ 4133378 (+) |
| CI01000069_04556116_04558002 | PYY, PYYA | other | downstream | 1781705 | 4555269 ~ 4558480 (+) |
