G274396


Basic Information

Item Value
gene id G274396
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2814671 ~ 2814906 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311316
GTGACAGCCAGACTCCACCTATGGCCATATAAGGACTCAATTGACCTATATCCTCCTGACTACCAGCTATGGAGTTTTGTCCTCTACAGAGGACATTATATTTTAGTGAATTTCTCTGAGACCTTACATGACACAGTTTTAAGTTCTGTAAAGAGCACATTCAGGGCTTTTCAGAGATACCAAATGTTCGGAGGTTTCACCATGACCACTTCCTCTCCTTGGTCTTTAAAATGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311316 True 236 lncRNA 0.42 1 2814671 2814906

Neighbor

gene id symbol gene type direction distance location
CI01000069_02540591_02547912 NA coding upstream 266649 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 347274 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 348990 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 416939 2393010 ~ 2397732 (+)
CI01000069_02311794_02313206 NA coding upstream 499661 2311794 ~ 2315010 (+)
CI01000069_02818349_02821933 CLDNI coding downstream 3334 2818240 ~ 2821937 (+)
CI01000069_02857196_02860525 NA coding downstream 41516 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 46748 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 78512 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 89077 2903983 ~ 2905654 (+)
G274395 NA non-coding upstream 1820 2812445 ~ 2812851 (+)
G274317 NA non-coding upstream 3219 2805113 ~ 2811452 (+)
G274342 NA non-coding upstream 14470 2798384 ~ 2800201 (+)
G274339 NA non-coding upstream 34387 2779556 ~ 2780284 (+)
G274391 NA non-coding upstream 37644 2776816 ~ 2777027 (+)
G274400 NA non-coding downstream 19160 2834066 ~ 2834300 (+)
G274399 NA non-coding downstream 19801 2834707 ~ 2840042 (+)
G274403 NA non-coding downstream 29824 2844730 ~ 2845169 (+)
G274356 NA non-coding downstream 38514 2853420 ~ 2855597 (+)
G274412 NA non-coding downstream 64733 2879639 ~ 2882570 (+)
G274270 NA other upstream 133513 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 642478 2031954 ~ 2040427 (+)
G273359 NA other upstream 2335590 477727 ~ 479081 (+)
G274603 NA other downstream 985117 3800023 ~ 3803501 (+)
G274619 NA other downstream 1314222 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1740403 4555269 ~ 4558480 (+)

Expression


Co-expression Network