G274356


Basic Information

Item Value
gene id G274356
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 2853420 ~ 2855597 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311273
GGCGAGAGGTGGCTTTCGTTTGCTGCTCATCAAACAGCCGTTGGATAATTTCACCATCGGGAACCGCAGGGGTTTCGTGAACGCGAAGCCGCTTGATCGGTTCAGGGCAACTTCCTCATATTCCCATAGAGTGAATCATCATCCGTCCGTCCGGTGCGTTGGCATCCAAGCTACCAGCGCGCTGTGGGACCCGTGTGTTTGCAAAAAACTGATACAGAAGACTCATTTACAGGACATTTCGACCTGAAAGAAGCCAGAGGCAGGTGTATTTTCGGTAACAAATACCGGTATGCGTTTAATATAGTGATGATACGACAATATTGCTTGGCACCAACCATAAGTAGTCAGAATAAAAATATAAAGTACAGTGCCAGAATCGATTTGACATCCCACGGCGTTTAGGGGGTTAACATTAAGATATTCGGCTAACGTAAAAAAGCACGCAAGTTTGATATGTAGTATTATCAAATTCTCATAGATGTGTCAAGTTTTTTTTCTCCCCCAGATATCAAGCATCTCCTCCTCATCAGCGATGAGCACTAAGTGCACCGTGCAAAGAAAAAGTGCACACATGTATCATGTGCTTTCCCTCTTTAAGTTTAACAATATGGATATTCTGAAATCAAACGCACTCAGTGCGTTTTCTGTTCCCTGTCATACACTACCCGGATAGCTCAAGAGCTAACGGGCTAGCTGCCGTCACCTTGATTGTGCTGACTGCAAACACACGCGAGCTTCACAGTCACTGCTTTAGCAGCCGTTAAACATCACCACCGGTTTTCCCAAACAGCGGCACATGCATTCCTGCAATTCTCCCCCTACTCCGACTAAAATGTATCCGTAGGCATGGCATTTGTCATCCAGCAGACGGGGGAATGTACGTGGTGCTCAGCTCCCAGGAACACGTCTCCCTGATGGTGCCAAGTGATGTTGCTGCTAGCTTGCAGTGATTTCAGCCAGCAGAGTTTTAAACGAGGGCTTTGGCTGTCTGGTACCGGTGTGCGGGAACATGCGGCTGGTGGAGGGGCGCAGCGGCCCGGCCTTCATTCCTTATCATCCGCTGATGCTGCAGCGCTCTAATCCAGTCTGGACCAACTGGGAAGAGCCGGGGGTGGCGCGAGGACAGGATGGATTCAGTTTGGGTCTTTTAGACATTTTCCCATTAAAATATATTTTCTTAGAATGAAATAGCAAGATGATATAAAAATGTGTATTTTCGCTCGTCTTATTTTATAATCATAGTATTTTATAATGATAGCTCAAGAATAGCGATGTCCGATTCTGAACGAGTCGGATCTTTTTAATGAATCGATTGGACAAAACCGGGTTTTAACGATTCGTTCACAAATCGAACTGAATGAATGAATCTCACTGAATCATTTGGCCGAGCTCTTGTCCGATTCGCACAGAGCCGATTTGGAGTGTAACGTAACCGAGGATTTGACTGATAAGGTCACCATAAAATAAAAATAGACAGTTCTTATTTTGATGGAATATTACAGTATTTATTATAAATTATTTATATGATCATTATTTTTTTAAATACATGTGCCCTCTAAGAATGTGTCTCTCAGTCACATCATGTGACCCAACAATTCAATGATCCCATTCCCTATGGACCAAATCAAGTCCCTTGTGTTTCATGCCGGCGTAAATGGCCGAATAAAATGTAACAAATGTGCCCACGTACTGAAAATATGTTTAGCATTTATATGTTCAGACAGGATATTTAAATTAATTTTAGTAATGTTAATTGTAAATGATATTATTTTCTTCTTTAAAGAGCTGAATCATGGGTGAATCATGAATTGGGACACATTAAATTACCAATTATTAATAAAACACAGTCGATAAAGTGTAATGTACAGTAAAAGATTCAATAATATAAAGCTCTTCACAAGCTTAAGCCGTAAGTTGTTTGGGTAAACAGTTACTAAATTGTCTATTTTTGTTTAATTGCTCATTTATTTTAGCTACAAGGCCGTGCAACAATATAGGCTACTATGTATCCAGGTCAAAACCTTTCAATTTATTTAGTATTACACAACGTTCACCGATTTTAGTGCTGTTCTCTCTCTGGCCATTTTAGAGATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311273 True 2095 lncRNA 0.41 2 2853420 2855597

Neighbor

gene id symbol gene type direction distance location
CI01000069_02818349_02821933 CLDNI coding upstream 31483 2818240 ~ 2821937 (+)
CI01000069_02540591_02547912 NA coding upstream 305398 2540510 ~ 2548022 (+)
CI01000069_02466489_02467309 NA coding upstream 386023 2465780 ~ 2467397 (+)
CI01000069_02454588_02465668 MYBPC2, MYBPC2A coding upstream 387739 2454588 ~ 2465681 (+)
CI01000069_02393010_02396796 AKT1S1 coding upstream 455688 2393010 ~ 2397732 (+)
CI01000069_02857196_02860525 NA coding downstream 825 2856422 ~ 2860562 (+)
CI01000069_02862381_02864927 PRF1.1 coding downstream 6057 2861654 ~ 2864993 (+)
CI01000069_02894136_02894807 COX6A2 coding downstream 37821 2893418 ~ 2894947 (+)
CI01000069_02903983_02905418 NA coding downstream 48386 2903983 ~ 2905654 (+)
CI01000069_02927711_02933564 NA coding downstream 71840 2927437 ~ 2933579 (+)
G274403 NA non-coding upstream 8251 2844730 ~ 2845169 (+)
G274399 NA non-coding upstream 13378 2834707 ~ 2840042 (+)
G274400 NA non-coding upstream 19120 2834066 ~ 2834300 (+)
G274396 NA non-coding upstream 38514 2814671 ~ 2814906 (+)
G274395 NA non-coding upstream 40569 2812445 ~ 2812851 (+)
G274412 NA non-coding downstream 24042 2879639 ~ 2882570 (+)
G274414 NA non-coding downstream 34166 2889763 ~ 2889973 (+)
G274433 NA non-coding downstream 150652 3006249 ~ 3008232 (+)
G274355 NA non-coding downstream 225898 3081495 ~ 3081791 (+)
G274467 NA non-coding downstream 245178 3100775 ~ 3101359 (+)
G274270 NA other upstream 172262 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 681227 2031954 ~ 2040427 (+)
G273359 NA other upstream 2374339 477727 ~ 479081 (+)
G274603 NA other downstream 944426 3800023 ~ 3803501 (+)
G274619 NA other downstream 1273531 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 1699712 4555269 ~ 4558480 (+)

Expression


Co-expression Network