G274733


Basic Information

Item Value
gene id G274733
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3804616 ~ 3807059 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311700
AGATATACACATACAGTGAATTTTGTAGTCCTTGTACTGTCGGTCCTCAATAGCAGTGACATAGAGCGTGGCTCTGTCAGGGAAAATCAGACCATCAGGTTTCAGCCATTTGTCTCTTGCATAAATGACAGTGTTGAGCATGGATTCGTAGAAGAGACAGTAGCCCATCCATTCAGAGATGATTATGTCTACTTTTTCCACGGGAAGCTCAACCTCCTCCACTTTGCCCTTAATAATGGTTACGATATGATCCAACTTGTTGGCCTTCACAATCTTCACAGCATAGTCTGATATACTGCTGCACTCAATCCCAATAACTTTTTTGGCCCCAGCTTTGGCTGCAAACATACAGAGGATGCCGGTTCCACTTCCCACATCCAGCACCACTTTATCCTTGAAGAGATGCTTGTTGTGGAACATGGAGTTTCTGTACGTCAGAGTACGAACTTCATCCTTTAGCATCTCCTCATGAATGCCAAAGTGTGCATAGGAATCAAAGTAGTAGTCTTTGGAGGTCATATCTTCTGCTGCAGGTTTCGCTGAGCTCTCTCCCTGTGACACCTCCATTCCGTCTGCCGTCTCCGCCATTTCGATAAACTGGATTCCACGAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311700 True 611 lncRNA 0.45 6 3804616 3807059

Neighbor

gene id symbol gene type direction distance location
CI01000069_03766564_03767936 NA coding upstream 36418 3766564 ~ 3768198 (+)
CI01000069_03643296_03647762 SYT13, SYT5B, SYT5A coding upstream 156830 3643155 ~ 3647786 (+)
CI01000069_03636156_03639756 NA coding upstream 164631 3635980 ~ 3639985 (+)
CI01000069_03631837_03632897 NA coding upstream 171653 3631837 ~ 3632963 (+)
CI01000069_03625937_03626925 NA coding upstream 177455 3625937 ~ 3627161 (+)
CI01000069_03812664_03832205 AP2A1 coding downstream 5605 3812664 ~ 3832279 (+)
CI01000069_03835903_03837843 NA coding downstream 28844 3835903 ~ 3838319 (+)
CI01000069_03839830_03843013 RRAS coding downstream 32771 3839830 ~ 3843569 (+)
CI01000069_03845642_03851052 PRRG2 coding downstream 38583 3845642 ~ 3851213 (+)
CI01000069_03854857_03870627 PRR12, PRR12B coding downstream 47798 3854857 ~ 3870933 (+)
G274731 NA non-coding upstream 6741 3797568 ~ 3797875 (+)
G274628 NA non-coding upstream 7644 3791506 ~ 3796972 (+)
G274721 NA non-coding upstream 31072 3773094 ~ 3773544 (+)
G274716 NA non-coding upstream 42978 3760901 ~ 3761638 (+)
G274715 NA non-coding upstream 67083 3737265 ~ 3737533 (+)
G274737 NA non-coding downstream 66717 3873776 ~ 3873980 (+)
G274743 NA non-coding downstream 76478 3883537 ~ 3883757 (+)
G274746 NA non-coding downstream 115229 3922288 ~ 3922571 (+)
G274748 NA non-coding downstream 125009 3932068 ~ 3932404 (+)
G274760 NA non-coding downstream 191924 3998983 ~ 4002223 (+)
G274603 NA other upstream 1115 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 909728 2893418 ~ 2894947 (+)
G274270 NA other upstream 1123458 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1632423 2031954 ~ 2040427 (+)
G274619 NA other downstream 322069 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 748250 4555269 ~ 4558480 (+)
G274953 NA other downstream 1117408 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1239168 5045967 ~ 5049408 (+)

Expression


Co-expression Network