G274743


Basic Information

Item Value
gene id G274743
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3883537 ~ 3883757 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311711
CTCTAAATGGCTTTTGTGAATGTATGAGTACCAATGCATTATCTTTTTGACACACGGCACAATAATTGGTGCTCAGTAACAACAAAATAATGAGCTCAAAAGAGTTAACAGGCCCTTCCGACACCGACATTCTGGGAGCCGGCATGTACAGGTGCCCCAGGGTGAGATAGACGGCGAGTATATTAGTTTCAGATTATCCACCTCTCTCATTTTTCTTCCCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311711 True 221 lncRNA 0.44 1 3883537 3883757

Neighbor

gene id symbol gene type direction distance location
CI01000069_03854857_03870627 PRR12, PRR12B coding upstream 12604 3854857 ~ 3870933 (+)
CI01000069_03845642_03851052 PRRG2 coding upstream 32324 3845642 ~ 3851213 (+)
CI01000069_03839830_03843013 RRAS coding upstream 39968 3839830 ~ 3843569 (+)
CI01000069_03835903_03837843 NA coding upstream 45218 3835903 ~ 3838319 (+)
CI01000069_03812664_03832205 AP2A1 coding upstream 51258 3812664 ~ 3832279 (+)
CI01000069_03886826_03898833 SCAF1 coding downstream 3069 3886826 ~ 3899025 (+)
CI01000069_03902139_03920099 TRPM4A coding downstream 18382 3902139 ~ 3920299 (+)
CI01000069_03927870_03929948 NA coding downstream 44113 3927870 ~ 3930379 (+)
CI01000069_03935114_03939004 NOSIP coding downstream 50551 3934308 ~ 3939158 (+)
CI01000069_03953485_03961584 PAX10 coding downstream 69587 3953344 ~ 3961836 (+)
G274737 NA non-coding upstream 9557 3873776 ~ 3873980 (+)
G274733 NA non-coding upstream 76478 3804616 ~ 3807059 (+)
G274731 NA non-coding upstream 85662 3797568 ~ 3797875 (+)
G274628 NA non-coding upstream 86565 3791506 ~ 3796972 (+)
G274721 NA non-coding upstream 109993 3773094 ~ 3773544 (+)
G274746 NA non-coding downstream 38531 3922288 ~ 3922571 (+)
G274748 NA non-coding downstream 48311 3932068 ~ 3932404 (+)
G274760 NA non-coding downstream 115226 3998983 ~ 4002223 (+)
G274671 NA non-coding downstream 255373 4139130 ~ 4140762 (+)
G274659 NA non-coding downstream 257123 4140880 ~ 4141167 (+)
G274603 NA other upstream 80036 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 988649 2893418 ~ 2894947 (+)
G274270 NA other upstream 1202379 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1711344 2031954 ~ 2040427 (+)
G274619 NA other downstream 245371 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 671552 4555269 ~ 4558480 (+)
G274953 NA other downstream 1040710 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1162470 5045967 ~ 5049408 (+)

Expression


Co-expression Network