G274748


Basic Information

Item Value
gene id G274748
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 3932068 ~ 3932404 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311717
GTCCTTTTTAAGCATAGGAAAACTTACATCCCACTCAAACTTATGTTTTGGTCTAATAAGAAAAGGTCAAACAGATTTATCCATTATGTCATAGTTGGTGTAACAGCTAGGTCAGAGTGACTGGTCAAATGTTAAAGAATAGATACAAAAGGTGTTGTTTTCACACCCTTAAGGGAATTTTGCAGATCTTGCATTATCACATGTCTTAAGAAATAGAAACGGACATATTTTGATACAAAGGTACATCAAGTTAAAATGAGCAACTAATTCTGAAAACATTGCTTCTGCAGTACTTGGCAGGCGTCCAATATCTAACCACAAACGTGTCAACATAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311717 True 337 lncRNA 0.35 1 3932068 3932404

Neighbor

gene id symbol gene type direction distance location
CI01000069_03927870_03929948 NA coding upstream 1689 3927870 ~ 3930379 (+)
CI01000069_03902139_03920099 TRPM4A coding upstream 11769 3902139 ~ 3920299 (+)
CI01000069_03886826_03898833 SCAF1 coding upstream 33043 3886826 ~ 3899025 (+)
CI01000069_03854857_03870627 PRR12, PRR12B coding upstream 61135 3854857 ~ 3870933 (+)
CI01000069_03845642_03851052 PRRG2 coding upstream 80855 3845642 ~ 3851213 (+)
CI01000069_03935114_03939004 NOSIP coding downstream 1904 3934308 ~ 3939158 (+)
CI01000069_03953485_03961584 PAX10 coding downstream 20940 3953344 ~ 3961836 (+)
CI01000069_03965213_03971865 NA coding downstream 32708 3965112 ~ 3972048 (+)
CI01000069_03991989_03994139 NA coding downstream 59274 3991678 ~ 3994317 (+)
CI01000069_03995177_04005602 NA coding downstream 62705 3995109 ~ 4005602 (+)
G274746 NA non-coding upstream 9497 3922288 ~ 3922571 (+)
G274743 NA non-coding upstream 48311 3883537 ~ 3883757 (+)
G274737 NA non-coding upstream 58088 3873776 ~ 3873980 (+)
G274733 NA non-coding upstream 125009 3804616 ~ 3807059 (+)
G274731 NA non-coding upstream 134193 3797568 ~ 3797875 (+)
G274760 NA non-coding downstream 66579 3998983 ~ 4002223 (+)
G274671 NA non-coding downstream 206726 4139130 ~ 4140762 (+)
G274659 NA non-coding downstream 208476 4140880 ~ 4141167 (+)
G274669 NA non-coding downstream 251798 4184202 ~ 4192064 (+)
G274653 NA non-coding downstream 289018 4221422 ~ 4370572 (+)
G274603 NA other upstream 128567 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1037180 2893418 ~ 2894947 (+)
G274270 NA other upstream 1250910 2672624 ~ 2681158 (+)
CI01000069_02033431_02040119 EIF3D.S, EIF3D other upstream 1759875 2031954 ~ 2040427 (+)
G274619 NA other downstream 196724 4129128 ~ 4133378 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 622905 4555269 ~ 4558480 (+)
G274953 NA other downstream 992063 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 1113823 5045967 ~ 5049408 (+)

Expression


Co-expression Network