G274659


Basic Information

Item Value
gene id G274659
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4140880 ~ 4141167 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311622
TCTCTCCAGGTCTCTGACAATCATAGAAAGGTAGATGTGACTAGCGCAGAACAGAGCACCGATCCAGCTCTCCTGGCTGTTATGATCATCAGCGGCTAGTCTATAAGTGCGGAGACCTGGTCCAGTGAACACCAAAGAGAAACAGAACTGACCATCCGCCTCACATGCCTGCACCATGCAGCCCTCAAGAACAATCACACCCAACAGGTTACGATCGCCCGGACGCTCCTGATAAAACAACAGATTCCCCTTCAACACAAACCAGCGGCGCAGGTAAGTGGTGTTCCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311622 True 288 lncRNA 0.52 1 4140880 4141167

Neighbor

gene id symbol gene type direction distance location
CI01000069_04113962_04124908 TBC1D10B coding upstream 15673 4113081 ~ 4125207 (+)
CI01000069_04089580_04103908 HSD3B7 coding upstream 36221 4089580 ~ 4104659 (+)
CI01000069_04055396_04078361 SETD1A coding upstream 62140 4055396 ~ 4078740 (+)
CI01000069_04047810_04052352 NA coding upstream 88234 4047576 ~ 4052646 (+)
CI01000069_04042802_04047285 NA coding upstream 93523 4042802 ~ 4047357 (+)
CI01000069_04143761_04147538 CD2BP2 coding downstream 2594 4143761 ~ 4147679 (+)
CI01000069_04151875_04159107 NA coding downstream 10708 4151875 ~ 4159191 (+)
CI01000069_04165021_04170544 NA coding downstream 22961 4164128 ~ 4170555 (+)
CI01000069_04203202_04214241 NA coding downstream 62035 4203202 ~ 4214325 (+)
CI01000069_04230190_04235064 NA coding downstream 88202 4229369 ~ 4235081 (+)
G274671 NA non-coding upstream 118 4139130 ~ 4140762 (+)
G274760 NA non-coding upstream 138657 3998983 ~ 4002223 (+)
G274748 NA non-coding upstream 208476 3932068 ~ 3932404 (+)
G274746 NA non-coding upstream 218309 3922288 ~ 3922571 (+)
G274743 NA non-coding upstream 257123 3883537 ~ 3883757 (+)
G274669 NA non-coding downstream 43035 4184202 ~ 4192064 (+)
G274653 NA non-coding downstream 80255 4221422 ~ 4370572 (+)
G274775 NA non-coding downstream 116277 4257444 ~ 4306259 (+)
G274779 NA non-coding downstream 127048 4268215 ~ 4268822 (+)
G274781 NA non-coding downstream 129049 4270216 ~ 4272592 (+)
G274619 NA other upstream 7502 4129128 ~ 4133378 (+)
G274603 NA other upstream 337379 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1245992 2893418 ~ 2894947 (+)
G274270 NA other upstream 1459722 2672624 ~ 2681158 (+)
CI01000069_04556116_04558002 PYY, PYYA other downstream 414142 4555269 ~ 4558480 (+)
G274953 NA other downstream 783300 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 905060 5045967 ~ 5049408 (+)

Expression


Co-expression Network