G274653


Basic Information

Item Value
gene id G274653
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4221422 ~ 4370572 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311616
ACCACGTTCATTAAATTTATTTAAACATGCACACATTCATTCTTAATCTATGCTGAAAACAGCTCTGTAAATGTTTTTGTATCGGCACGTTCAATTACGAATTACACTACATGACTCAAGAAAACACAGCAAAATTGCAACTTCATTAACTATTTTGCAGTATGCTCAAGATCCTAATAATTTAACATATTATGCTATTTAGCCTTGACAAATAATTTTAAATCATTATTTACAGTCCCCCTGCAGTACNNNNNNNNNNNNNNNNGGGTTTGGAGCACAGGTTGAAAAAGACTCGAAGAGCACTTAATACTGCTACTTATTGTATTAAACAACACCCTGTCATTTTCCAATGTTTGACTCATATATGCCATTAAATTGTATGTCTATACCCAAAATACTGTATCTCTTTATATCTTCTTATTTTACACTTTAAACATATTTTAAGGTTAACATTAAAAGTGTAAAAGAGTTGTTGCTAATATTTTAATTTAAAAACAATTCTTATTAATAAAAATACAGTGAGAAAAACAGAACAAAAATATGTTCTGTTAAGCTCTCTTTCACCTGTTACTAGATGTGATCAAGAGACAGTCTTATATCCCTGGGATATCACTTGCATCACTGGATACATTAAACAAAATATATCAGTTGGAACATGTGCAGCAGTCTGTGATGCACTGAAGAATGAATGCACTGTATTATCATCACTCATATTTAGCACAAAAGCTTTGCAAGATTGTAGTCATCTGTTGTCTCTCTGTTCATCACACTCTAAAGGTCCTTTTTCATTAAAACCATCAGTTTGGAGCCTCATTAATTATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311616 True 822 lncRNA 0.31 3 4221422 4370572

Neighbor

gene id symbol gene type direction distance location
CI01000069_04203202_04214241 NA coding upstream 7097 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 50867 4164128 ~ 4170555 (+)
CI01000069_04151875_04159107 NA coding upstream 62231 4151875 ~ 4159191 (+)
CI01000069_04143761_04147538 CD2BP2 coding upstream 73743 4143761 ~ 4147679 (+)
CI01000069_04113962_04124908 TBC1D10B coding upstream 96215 4113081 ~ 4125207 (+)
CI01000069_04412903_04419976 NA coding downstream 40663 4411235 ~ 4422342 (+)
CI01000069_04425809_04438936 NA coding downstream 53371 4423943 ~ 4439161 (+)
CI01000069_04527086_04527715 NA coding downstream 156429 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 184697 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 191889 4562461 ~ 4568896 (+)
G274669 NA non-coding upstream 29358 4184202 ~ 4192064 (+)
G274659 NA non-coding upstream 80255 4140880 ~ 4141167 (+)
G274671 NA non-coding upstream 80660 4139130 ~ 4140762 (+)
G274760 NA non-coding upstream 219199 3998983 ~ 4002223 (+)
G274748 NA non-coding upstream 289018 3932068 ~ 3932404 (+)
G274823 NA non-coding downstream 57518 4428090 ~ 4428396 (+)
G274824 NA non-coding downstream 58076 4428648 ~ 4429418 (+)
G274825 NA non-coding downstream 60442 4431014 ~ 4433247 (+)
G274826 NA non-coding downstream 63166 4433738 ~ 4433938 (+)
G274619 NA other upstream 88044 4129128 ~ 4133378 (+)
G274603 NA other upstream 417921 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1326534 2893418 ~ 2894947 (+)
G274270 NA other upstream 1540264 2672624 ~ 2681158 (+)
G274953 NA other downstream 553895 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 675655 5045967 ~ 5049408 (+)

Expression


Co-expression Network