G274824


Basic Information

Item Value
gene id G274824
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4428648 ~ 4429418 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311805
AAAATAAGTTGATAGATTGGATAGAATTTGACATTATTATGGTTTCATTCTGTTTTCTAAAGAATGGAAGTCAAAAGATTTATCACAATTTTATTCTTCAGGTTTATGCATCTAACAGTGAACTAATGGTCGGTAGAAAAAATATAGTATCAACTTACATGAAAACATTTTTATATATTACGAAGGCGGCCATCTAATTTGTAGGTGCTTGGTTTCTGAGTTCAGATAAGTCACTCTAATCTGTCAATAAATAGGTGCATGACATTGATTTTGGTATTCAAAGCATAAAATAGGTTTCTCAGTTTGTCAAATGTCACATGTGAACTAACATGTTTCTACATCTGCAGTACATGCAGCAGATGAATGGTCACAAAATCCACATTGTATCTGACAACGTGATATAAAGAGATCTCTCGCTCTATCCATTTCTAGTGTGCTTCTTGCATGCAGAATGAGCACCTCCTATAATCCACTTCTCTGAGAGAAATGCAAAGGGGGAAAAGAGAGGAGATGAAAGAGGGCTGGGTAGTTACGATGGATTACAGGCTCAGTGAGGCAGTGGGGGAGGCCAGTGGACTGATAATATTTAACCAGACCCGGGTGGACCATCTGGAACCACCCCCCTTCTTCAACAGTCCAGCTCTCACATCTGGGTCCTCCTCTGAAGGAATAACTCACATTTGCCTTCAAATGAATAATGCTGTTTTTACATTACGTGGAAAGAATTTCAACACAAACTTCATTGACCTCATGCAAAGCAACATGATAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311805 True 771 lncRNA 0.38 1 4428648 4429418

Neighbor

gene id symbol gene type direction distance location
CI01000069_04412903_04419976 NA coding upstream 7460 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 193567 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 214323 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 258093 4164128 ~ 4170555 (+)
CI01000069_04151875_04159107 NA coding upstream 269457 4151875 ~ 4159191 (+)
CI01000069_04527086_04527715 NA coding downstream 97583 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 125851 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 133043 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 182752 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 344558 4773976 ~ 4774959 (+)
G274823 NA non-coding upstream 252 4428090 ~ 4428396 (+)
G274653 NA non-coding upstream 58076 4221422 ~ 4370572 (+)
G274825 NA non-coding downstream 1596 4431014 ~ 4433247 (+)
G274826 NA non-coding downstream 4320 4433738 ~ 4433938 (+)
G274827 NA non-coding downstream 4656 4434074 ~ 4434668 (+)
G274828 NA non-coding downstream 5746 4435164 ~ 4436147 (+)
CI01000069_04425809_04438936 NA non-coding downstream 9147 4423943 ~ 4439161 (+)
G274619 NA other upstream 295270 4129128 ~ 4133378 (+)
G274603 NA other upstream 625147 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1533760 2893418 ~ 2894947 (+)
G274270 NA other upstream 1747490 2672624 ~ 2681158 (+)
G274953 NA other downstream 495049 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 616809 5045967 ~ 5049408 (+)

Expression


Co-expression Network