G274827


Basic Information

Item Value
gene id G274827
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4434074 ~ 4434668 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311808
ATATAAGAGGAAATGCAAACAGATGTTGAGCAATGAGGCAATGAAACTGCATGTTAATGCAGTATGCATATTTGGCATAAAAATATTAATATCATTTATATGCATTTGGCAGATGCTATCATCCAAAGCAACTTATAATGAATTCAAGGTACACATATGACCAGTTCTTGCTTGATCTGGAAATCGAAACCATGACCTTGGTGTTGTTAGCGCCATGCTCTATTGCTTGAGCGACGGGAAGGCTAATATCAGAGAAAAAGCTCAAATTAAGCTTGAAATCACAAAGAAAAGGGAAAATTAATGATAAATATTTATACGAAACCTCAGTGACATTGAAAGCTTCCCCTCTAAAAACACCCACGATCCACCTCACACTTGGTCTGCCAATCACACCGTCTGCGCTGCAGTAAAATGTCAGCAGCCATGGAGTGCGAAAGTGTGAATGTGAGGTGTGAGGGAGGACGGCATTTGGGTCACAGGGTTTCACACCAGGCATCAGGCACAACAAAGAAACTCAAATAAGAAACTCAGAGAACTTAATATGGCAATACACAACAATAAGATTTCACAGCAAGTGAATTGCTAACAGATTAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311808 True 595 lncRNA 0.39 1 4434074 4434668

Neighbor

gene id symbol gene type direction distance location
CI01000069_04412903_04419976 NA coding upstream 12886 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 198993 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 219749 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 263519 4164128 ~ 4170555 (+)
CI01000069_04151875_04159107 NA coding upstream 274883 4151875 ~ 4159191 (+)
CI01000069_04527086_04527715 NA coding downstream 92333 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 120601 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 127793 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 177502 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 339308 4773976 ~ 4774959 (+)
G274826 NA non-coding upstream 136 4433738 ~ 4433938 (+)
G274825 NA non-coding upstream 827 4431014 ~ 4433247 (+)
G274824 NA non-coding upstream 4656 4428648 ~ 4429418 (+)
G274823 NA non-coding upstream 5678 4428090 ~ 4428396 (+)
G274828 NA non-coding downstream 496 4435164 ~ 4436147 (+)
CI01000069_04425809_04438936 NA non-coding downstream 3897 4423943 ~ 4439161 (+)
G274831 NA non-coding downstream 4652 4439320 ~ 4439744 (+)
G274832 NA non-coding downstream 5143 4439811 ~ 4440019 (+)
G274833 NA non-coding downstream 5999 4440667 ~ 4440947 (+)
G274619 NA other upstream 300696 4129128 ~ 4133378 (+)
G274603 NA other upstream 630573 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1539186 2893418 ~ 2894947 (+)
G274270 NA other upstream 1752916 2672624 ~ 2681158 (+)
G274953 NA other downstream 489799 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 611559 5045967 ~ 5049408 (+)

Expression


Co-expression Network