G274828



Basic Information


Item Value
gene id G274828
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4435164 ~ 4436147 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU311809
TTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTATTCTAAATAGTGCATAAAGTATCAGCAATCGCATCATTTGGCCATAACACAAAGCGATCATCATATCAGTCAAAATGTTTATATTGGTACATTATTAATTTGCAACTAAAACATGATAATGCTACAAGGGTACTATGTTTTTCCATGTTCTTGTAACGGCATATTTTGTGTGATTGATGCCTCTGTTAAGGCTTAGTGGTGTTTAAAATTGCATTAAATACACTCCTGCAATCTCACTAAAAGAAAAAAACAAGTCCCACTCGCACACACATACACACCACACAAACAATGCAGCGATTGAGAGATACAAAAATATTCCATGCTTCAGCAAAAAATAAAGCACAGCATAGAAGGTATCATGCTGCTTTCCACCGCCCCTTTCTGTTGCCTTCTTTCCTCTCTTCACTTTCTCTGTAAGTACACATATCTCAGGATGGGGTCTGGAGATTTATGAGCTATAGTGAGAAGTGGGCCAGAAAGCCCTCCCCGGCTCTGGATCTGCTTTGCCGCCTCCCTCACGTCTTTTATTTCCATCCCTCCCTCTCTGGTTGCAGCGCTTTCTGCTCACATTACCCTCTGTTGAGTGATAAACATTGTCTGTGGGCAGTAAATTCAGTCTGAGCCTGACAGGCCTCCAATAAACCAGTCTATTCTCTCACTGTGAGGAGGCTTTGGTCTGGAGGCCCACAGGAAGGGAATGCAGACACACACACACACACACATACACACACTCACAAACTAACATACACGCAGATATAAAGATAAACAAGTTAAGAGGGACAAGATACATGTGGCATACATCATGCACATCAAAGGCACAAATAAGGAACAAACACAAGAGACACATTCATATGCACTCGCACAAAGAAACAATGATCAACATGCGTCTGACTAAAACTCGCTAGCCGGATTTACACAACCAACGAACAAAAGCTTAGAAATCC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU311809 True 984 lncRNA 0.41 1 4435164 4436147

Neighbor


gene id symbol gene type direction distance location
CI01000069_04412903_04419976 NA coding upstream 13976 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 200083 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 220839 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 264609 4164128 ~ 4170555 (+)
CI01000069_04151875_04159107 NA coding upstream 275973 4151875 ~ 4159191 (+)
CI01000069_04527086_04527715 NA coding downstream 90854 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 119122 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 126314 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 176023 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 337829 4773976 ~ 4774959 (+)
G274827 NA non-coding upstream 496 4434074 ~ 4434668 (+)
G274826 NA non-coding upstream 1226 4433738 ~ 4433938 (+)
G274825 NA non-coding upstream 1917 4431014 ~ 4433247 (+)
G274824 NA non-coding upstream 5746 4428648 ~ 4429418 (+)
G274823 NA non-coding upstream 6768 4428090 ~ 4428396 (+)
CI01000069_04425809_04438936 NA non-coding downstream 2418 4423943 ~ 4439161 (+)
G274831 NA non-coding downstream 3173 4439320 ~ 4439744 (+)
G274832 NA non-coding downstream 3664 4439811 ~ 4440019 (+)
G274833 NA non-coding downstream 4520 4440667 ~ 4440947 (+)
G274834 NA non-coding downstream 4929 4441076 ~ 4441757 (+)
G274619 NA other upstream 301786 4129128 ~ 4133378 (+)
G274603 NA other upstream 631663 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1540276 2893418 ~ 2894947 (+)
G274270 NA other upstream 1754006 2672624 ~ 2681158 (+)
G274953 NA other downstream 488320 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 610080 5045967 ~ 5049408 (+)

Expression



Co-expression Network