G274647


Basic Information

Item Value
gene id G274647
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4451428 ~ 4452109 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311610
GAGATGGAGTGCTGTATCCACTGACAGGAAGTCCTGGAAGTGCTGGAGGGGAGAGCCCTCCTAGCATATGAGGAAAGAAGTAAGGGTAGTGCGGCATAGGGAAGCCCCCTAAAGGGGTGCCCAACCCTCCGGGGCTGGGGCAGGGGTTGCCGTTTCCAGACATTGCACGCTCAGATACAACACTGAGTCCCAGACCTCTGTGCAGGCTATCCGTGATGCCGGATGTCTACTTTCCCATCATGAGCTACTTTTGGTAATCCAACTAGGAGAGCTTTGTCTGCGATTGTCCGTGTGGGCGCTTACTATTGTGGCTGTAAGACAGAGACAGGTTAATGACTGATGATCCAGGGTGCGTACGAGTGGTTATGACGCCATTCGATCACAGTGTACGGCTCACAGGTAAACTGCTCTTTGTTTTGGTGTTATGTAACTCTCTGGGTACAATCCCAATGTTCTCTTGGAATAGTAGTGTGTGAGGCGGTATATTCCAGCACTGTTTGACAGAGATGTTATGTAGCAGCAGGGGAGTGGTTTGACTCTTCACAAGGACCTGAGCTCACTCCAATCCACCAGATTTCAGGAGGACTGACTTGGACGATGTGACGCAAGAGGAATCGAGATGCCGTGCTCCAGAGGTCACAAAATGCCCTCGGTTCAAACCTGTCAGAGCGAGTCAGTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311610 True 682 lncRNA 0.52 1 4451428 4452109

Neighbor

gene id symbol gene type direction distance location
CI01000069_04425809_04438936 NA coding upstream 12436 4423943 ~ 4439161 (+)
CI01000069_04412903_04419976 NA coding upstream 30240 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 216347 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 237103 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 280873 4164128 ~ 4170555 (+)
CI01000069_04527086_04527715 NA coding downstream 74892 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 103160 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 110352 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 160061 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 321867 4773976 ~ 4774959 (+)
G274838 NA non-coding upstream 1722 4449490 ~ 4449706 (+)
G274837 NA non-coding upstream 2367 4448172 ~ 4449061 (+)
G274836 NA non-coding upstream 5516 4445043 ~ 4445912 (+)
G274835 NA non-coding upstream 8712 4441776 ~ 4442716 (+)
G274834 NA non-coding upstream 9671 4441076 ~ 4441757 (+)
G274839 NA non-coding downstream 912 4453021 ~ 4453297 (+)
G274840 NA non-coding downstream 1874 4453983 ~ 4454367 (+)
G274841 NA non-coding downstream 2954 4455063 ~ 4455283 (+)
G274842 NA non-coding downstream 3465 4455574 ~ 4455928 (+)
G274843 NA non-coding downstream 4765 4456874 ~ 4457505 (+)
G274619 NA other upstream 318050 4129128 ~ 4133378 (+)
G274603 NA other upstream 647927 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1556540 2893418 ~ 2894947 (+)
G274270 NA other upstream 1770270 2672624 ~ 2681158 (+)
G274953 NA other downstream 472358 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 594118 5045967 ~ 5049408 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_026498 rarab coding NC_007114.7 CM002887.2 33065613 ~ 33259621 (-)