G274846


Basic Information

Item Value
gene id G274846
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4459012 ~ 4459391 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311827
ATGAAAGTCCATAGCCCAGTAATGGGCTCTATTTCCCCTTCCCCTCGTCCATTAAGACAGCCAAATGAAATGAAGGGAAATGAATTGAGACTGCAGACATGTGGTAAAGGAGACAAGTGGGAGAGAGGGAGGGTTCGAGAGTGAGAGAGGGGAGGTAGTTTCAAAGGTCATTACTATAGGTATGAGATGAGCAGAGGTAATAAATCTATGCACTAAACGAGGACTATCACCTTTATGAGGGAGAGAGAGCTAAATGCATGTGTACGCCATGCATATAGAGTGTGCCAAGGGAGCATTTCAATTAGACAGGAAGAAAGGCTTGATCTATAGATACACACACGATCACTATTCATTCAATGCATTTGCAGCTTGCATGTTAG

Function

NR:

description
PREDICTED: sacsin-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311827 True 380 lncRNA 0.43 1 4459012 4459391

Neighbor

gene id symbol gene type direction distance location
CI01000069_04425809_04438936 NA coding upstream 20020 4423943 ~ 4439161 (+)
CI01000069_04412903_04419976 NA coding upstream 37824 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 223931 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 244687 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 288457 4164128 ~ 4170555 (+)
CI01000069_04527086_04527715 NA coding downstream 67610 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 95878 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 103070 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 152779 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 314585 4773976 ~ 4774959 (+)
G274845 NA non-coding upstream 358 4458414 ~ 4458654 (+)
G274844 NA non-coding upstream 756 4457962 ~ 4458256 (+)
G274843 NA non-coding upstream 1507 4456874 ~ 4457505 (+)
G274842 NA non-coding upstream 3084 4455574 ~ 4455928 (+)
G274841 NA non-coding upstream 3729 4455063 ~ 4455283 (+)
G274847 NA non-coding downstream 1197 4460588 ~ 4461607 (+)
G274848 NA non-coding downstream 2775 4462166 ~ 4463044 (+)
G274849 NA non-coding downstream 7357 4466748 ~ 4466959 (+)
G274850 NA non-coding downstream 7687 4467078 ~ 4467918 (+)
G274851 NA non-coding downstream 8555 4467946 ~ 4468473 (+)
G274619 NA other upstream 325634 4129128 ~ 4133378 (+)
G274603 NA other upstream 655511 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1564124 2893418 ~ 2894947 (+)
G274270 NA other upstream 1777854 2672624 ~ 2681158 (+)
G274953 NA other downstream 465076 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 586836 5045967 ~ 5049408 (+)

Expression


Co-expression Network