G274849


Basic Information

Item Value
gene id G274849
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4466748 ~ 4466959 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311830
CTCGAATGAATGCCGACCACTATCACGACACAATAAAACAGCATATCACCTCTTATTAACCATAAATTCAGTTCCCAAATTGAATAAATTCAACAATCTACAAATCAACATCCCTACAAATCTCTGAACATGCATCAGAGCGGGCTTCCTAAATTTATGTCAGCCAGCTGTTACGTGCCAAAACAAGCCTCCATCATACAATCCTTCATTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311830 True 212 lncRNA 0.39 1 4466748 4466959

Neighbor

gene id symbol gene type direction distance location
CI01000069_04425809_04438936 NA coding upstream 27756 4423943 ~ 4439161 (+)
CI01000069_04412903_04419976 NA coding upstream 45560 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 231667 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 252423 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 296193 4164128 ~ 4170555 (+)
CI01000069_04527086_04527715 NA coding downstream 60042 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 88310 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 95502 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 145211 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 307017 4773976 ~ 4774959 (+)
G274848 NA non-coding upstream 3704 4462166 ~ 4463044 (+)
G274847 NA non-coding upstream 5141 4460588 ~ 4461607 (+)
G274846 NA non-coding upstream 7357 4459012 ~ 4459391 (+)
G274845 NA non-coding upstream 8094 4458414 ~ 4458654 (+)
G274844 NA non-coding upstream 8492 4457962 ~ 4458256 (+)
G274850 NA non-coding downstream 119 4467078 ~ 4467918 (+)
G274851 NA non-coding downstream 987 4467946 ~ 4468473 (+)
G274854 NA non-coding downstream 7300 4474259 ~ 4474515 (+)
G274855 NA non-coding downstream 7571 4474530 ~ 4474877 (+)
G274856 NA non-coding downstream 8249 4475208 ~ 4476085 (+)
G274619 NA other upstream 333370 4129128 ~ 4133378 (+)
G274603 NA other upstream 663247 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1571860 2893418 ~ 2894947 (+)
G274270 NA other upstream 1785590 2672624 ~ 2681158 (+)
G274953 NA other downstream 457508 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 579268 5045967 ~ 5049408 (+)

Expression


Co-expression Network