G274858


Basic Information

Item Value
gene id G274858
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4483880 ~ 4484446 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311839
GTTTTTTTGAATCTTATAGATGGAGTTCCCATCCAATGCTACCTCATTTCCGGGTTTTATGACTTATTCCAGCAGACACTCTATATGGCGCTCAACCTCACTTTGTTGGTTGAAAATGCTGTCATTACAGTCAACAAGGTGTAGGATGTAAATACTTGTGCAGAAATCAGTTTTGAACTGAGGTGATTGACAGCTTCAGTGATAATAAAAAATAGTTTCTTTGTTCGATTTCTGCATATAAATTATTGACACATTGAACAACAGTTTGGTTCATCATCATCATGCAGCTCTAGGAGATTCTGTTCTCAACAATACAGAAAGAGTATATAAACACACACTCACACTGACACTTATAATATCAAGCCAGAATGAGGTCGAGGAAATGATGCAGCCCTTCCAGCTGGGTTTTTTGTGGCTATCAAAAATGTAGCATAATCTCTTGGGCTAGAAGACTAGAGTGTTTATTTTACTAGACTGAGACTCACAAGCCAATCCAGACCACACATATTTCGCTCTCCTCCACCCCGCACTCACTCACTCCCTCTTTCTAACACACCCTCCTAAATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311839 True 567 lncRNA 0.40 1 4483880 4484446

Neighbor

gene id symbol gene type direction distance location
CI01000069_04425809_04438936 NA coding upstream 44888 4423943 ~ 4439161 (+)
CI01000069_04412903_04419976 NA coding upstream 62692 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 248799 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 269555 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 313325 4164128 ~ 4170555 (+)
CI01000069_04527086_04527715 NA coding downstream 42555 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 70823 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 78015 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 127724 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 289530 4773976 ~ 4774959 (+)
G274857 NA non-coding upstream 341 4480464 ~ 4483539 (+)
G274856 NA non-coding upstream 7795 4475208 ~ 4476085 (+)
G274855 NA non-coding upstream 9003 4474530 ~ 4474877 (+)
G274854 NA non-coding upstream 9365 4474259 ~ 4474515 (+)
G274851 NA non-coding upstream 15407 4467946 ~ 4468473 (+)
G274859 NA non-coding downstream 344 4484790 ~ 4485514 (+)
G274860 NA non-coding downstream 1241 4485687 ~ 4486352 (+)
G274691 NA non-coding downstream 2964 4487410 ~ 4490369 (+)
G274681 NA non-coding downstream 8194 4492640 ~ 4497549 (+)
G274649 NA non-coding downstream 106422 4590868 ~ 4625092 (+)
G274619 NA other upstream 350502 4129128 ~ 4133378 (+)
G274603 NA other upstream 680379 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1588992 2893418 ~ 2894947 (+)
G274270 NA other upstream 1802722 2672624 ~ 2681158 (+)
G274953 NA other downstream 440021 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 561781 5045967 ~ 5049408 (+)

Expression


Co-expression Network