G274859


Basic Information

Item Value
gene id G274859
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4484790 ~ 4485514 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311840
CTGGAATTCACTTTGTTCATGACAGTCAATGTCAGTTTTACAGTTTTAGAGGTGCCTTGACTCCATAAAGATTGTCATTAATCATATGAGAATATACTACTAAGTGCTAATTTATCAGTATTGGGTGTCTAACACTTTAATAACACTATTAAATGTCATCTTTAACAGATATCACAATGAATATCCACTATATCCATACTTTACATTATCATGTTGTGATGCTTAAATTAATTTTTACAGAAAATAGTAGAATTTTAATTAGCCATTTATCATAGTTAGTGGTCATAACACGAAAATAATTATCAGCCAGAATTATAATATCGGTACATTCCTAACTGCAAGAGCACATGTCCCGACTGATCAAGCACAAGAGAGAGGGGTCAAAGCACACGGGGCAAGGATGACTAAGGAGCAGATGGCGATAAAAGTCTTACTCAAGGTCACAAGCGTAGTGAGACAAACAAATTGTGAACTGAGGAATTTTAAGCAGGGTCTTTCAGTTAATGGTGGACTTACTGCAGAGCCGACATCCCTATCAAGATATTAATTAATTCAGCTCCTCTGTTTGCCAAGAGGCAAAAAAGATACAGTGGAGTTATGGCCGCGGGTGAAAACATGAACACACTGGATAGCTGCTTTATAGTAGAAAATGAAGTTGTGCTTCTGATGAAATGAGGCACTGTTTTTCATGTTTGATACTGTAAAGCTGCTTCCTTTTAAGCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311840 True 725 lncRNA 0.36 1 4484790 4485514

Neighbor

gene id symbol gene type direction distance location
CI01000069_04425809_04438936 NA coding upstream 45798 4423943 ~ 4439161 (+)
CI01000069_04412903_04419976 NA coding upstream 63602 4411235 ~ 4422342 (+)
CI01000069_04230190_04235064 NA coding upstream 249709 4229369 ~ 4235081 (+)
CI01000069_04203202_04214241 NA coding upstream 270465 4203202 ~ 4214325 (+)
CI01000069_04165021_04170544 NA coding upstream 314235 4164128 ~ 4170555 (+)
CI01000069_04527086_04527715 NA coding downstream 41487 4527001 ~ 4527814 (+)
CI01000069_04556116_04558002 PYY, PYYA coding downstream 69755 4555269 ~ 4558480 (+)
CI01000069_04562461_04568806 MPP2A coding downstream 76947 4562461 ~ 4568896 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding downstream 126656 4612170 ~ 4623451 (+)
CI01000069_04773976_04774606 NA coding downstream 288462 4773976 ~ 4774959 (+)
G274858 NA non-coding upstream 344 4483880 ~ 4484446 (+)
G274857 NA non-coding upstream 1251 4480464 ~ 4483539 (+)
G274856 NA non-coding upstream 8705 4475208 ~ 4476085 (+)
G274855 NA non-coding upstream 9913 4474530 ~ 4474877 (+)
G274854 NA non-coding upstream 10275 4474259 ~ 4474515 (+)
G274860 NA non-coding downstream 173 4485687 ~ 4486352 (+)
G274691 NA non-coding downstream 1896 4487410 ~ 4490369 (+)
G274681 NA non-coding downstream 7126 4492640 ~ 4497549 (+)
G274649 NA non-coding downstream 105354 4590868 ~ 4625092 (+)
G274626 NA non-coding downstream 113610 4599124 ~ 4602018 (+)
G274619 NA other upstream 351412 4129128 ~ 4133378 (+)
G274603 NA other upstream 681289 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1589902 2893418 ~ 2894947 (+)
G274270 NA other upstream 1803632 2672624 ~ 2681158 (+)
G274953 NA other downstream 438953 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 560713 5045967 ~ 5049408 (+)

Expression


Co-expression Network