G274969


Basic Information

Item Value
gene id G274969
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4859370 ~ 4859591 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311963
CACATGTCGAAAAGGCTGATGGGAGAAGAGTGGGAGGTGTGGGGCGAATAGAGAAGCGTTTAAAAAAAAAAAAACAGAAAGAGTATAAATGAATAAATACCAGTCCAGAAAGTGTTCTGTTGCATCAAGACGCTCAGAGTTTACTGTCACGCTGAGGAGGAAAACAGCATGTGTGAAACACAGAACATCTCTTTGCTCTTCTCCGTCATTCACACACTTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311963 True 222 lncRNA 0.42 1 4859370 4859591

Neighbor

gene id symbol gene type direction distance location
CI01000069_04791495_04792375 NA coding upstream 66690 4791351 ~ 4792680 (+)
CI01000069_04776672_04785162 NA coding upstream 73938 4775370 ~ 4785432 (+)
CI01000069_04773976_04774606 NA coding upstream 84411 4773976 ~ 4774959 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding upstream 235919 4612170 ~ 4623451 (+)
CI01000069_04562461_04568806 MPP2A coding upstream 290474 4562461 ~ 4568896 (+)
CI01000069_04917103_04918567 ALKBH7 coding downstream 57512 4917103 ~ 4918901 (+)
CI01000069_04981836_04982608 NA coding downstream 121368 4980959 ~ 4983096 (+)
CI01000069_04990240_04994522 ALDH3B1 coding downstream 129144 4988735 ~ 4994869 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 coding downstream 143116 5002707 ~ 5023082 (+)
CI01000069_05033299_05034403 NA coding downstream 173708 5033299 ~ 5034605 (+)
G274963 NA non-coding upstream 588 4858303 ~ 4858782 (+)
G274965 NA non-coding upstream 1609 4857320 ~ 4857761 (+)
G274967 NA non-coding upstream 3763 4855406 ~ 4855607 (+)
G274977 NA non-coding upstream 4801 4854333 ~ 4854569 (+)
G274976 NA non-coding upstream 8336 4848022 ~ 4851034 (+)
G274978 NA non-coding downstream 640 4860231 ~ 4860440 (+)
G274979 NA non-coding downstream 1516 4861107 ~ 4861338 (+)
G274991 NA non-coding downstream 36619 4896210 ~ 4897011 (+)
G274993 NA non-coding downstream 47886 4907477 ~ 4907869 (+)
G274997 NA non-coding downstream 56262 4915853 ~ 4916085 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 300890 4555269 ~ 4558480 (+)
G274619 NA other upstream 725992 4129128 ~ 4133378 (+)
G274603 NA other upstream 1055869 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 1964482 2893418 ~ 2894947 (+)
G274953 NA other downstream 64876 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 186636 5045967 ~ 5049408 (+)

Expression


Co-expression Network