G274993


Basic Information

Item Value
gene id G274993
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4907477 ~ 4907869 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU311988
GCCTATATTTGATAGCGGCAATATGTCGCCAAATTGTGTTAATATCTTATTTAATATATTAAAATTTGTTACTGTAAAATATACACTGTATTGCCAAAAGTATTGGGACACCCCTCCAAATCATTGAATTCAGGTGTTCCAATCACTTCCATGGCCACAGGTGTATAAAATCAAGCACCTAGGCATGCAGACTGCTTCTACAAACATTTGTGAAAGAATGGGTCACTCTCAGGAGCTCAGTGAATTCAAGCGTGGTACCGTGATAGGTTGCCACCTGTGCAATAAGTCCATTTGTGAAATTTCCTCACTACTAAATATCCCACGGTCAACTAGTGGTATCAAAGTGGAAGCAATTGGGAACAACAGCAACTCAGCCATGTAAAATCACAAAGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU311988 True 393 lncRNA 0.39 1 4907477 4907869

Neighbor

gene id symbol gene type direction distance location
CI01000069_04791495_04792375 NA coding upstream 114797 4791351 ~ 4792680 (+)
CI01000069_04776672_04785162 NA coding upstream 122045 4775370 ~ 4785432 (+)
CI01000069_04773976_04774606 NA coding upstream 132518 4773976 ~ 4774959 (+)
CI01000069_04612170_04623197 GTPBP1, GTPBP1L, GTPB1 coding upstream 284026 4612170 ~ 4623451 (+)
CI01000069_04562461_04568806 MPP2A coding upstream 338581 4562461 ~ 4568896 (+)
CI01000069_04917103_04918567 ALKBH7 coding downstream 9234 4917103 ~ 4918901 (+)
CI01000069_04981836_04982608 NA coding downstream 73090 4980959 ~ 4983096 (+)
CI01000069_04990240_04994522 ALDH3B1 coding downstream 80866 4988735 ~ 4994869 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 coding downstream 94838 5002707 ~ 5023082 (+)
CI01000069_05033299_05034403 NA coding downstream 125430 5033299 ~ 5034605 (+)
G274991 NA non-coding upstream 10466 4896210 ~ 4897011 (+)
G274979 NA non-coding upstream 46139 4861107 ~ 4861338 (+)
G274978 NA non-coding upstream 47037 4860231 ~ 4860440 (+)
G274969 NA non-coding upstream 47886 4859370 ~ 4859591 (+)
G274963 NA non-coding upstream 48695 4858303 ~ 4858782 (+)
G274997 NA non-coding downstream 7984 4915853 ~ 4916085 (+)
G274950 NA non-coding downstream 34486 4942355 ~ 4973465 (+)
G274958 NA non-coding downstream 55768 4963637 ~ 4964941 (+)
G275008 NA non-coding downstream 61353 4969222 ~ 4986267 (+)
G275017 NA non-coding downstream 79896 4987765 ~ 4987990 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 348997 4555269 ~ 4558480 (+)
G274619 NA other upstream 774099 4129128 ~ 4133378 (+)
G274603 NA other upstream 1103976 3800023 ~ 3803501 (+)
CI01000069_02894136_02894807 COX6A2 other upstream 2012589 2893418 ~ 2894947 (+)
G274953 NA other downstream 16598 4924467 ~ 4926687 (+)
CI01000069_05046565_05048523 NA other downstream 138358 5045967 ~ 5049408 (+)

Expression


Co-expression Network