G275017


Basic Information

Item Value
gene id G275017
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 4987765 ~ 4987990 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU312016
ATACACTACTGGTCAAAAGTTTGGAATCGGTAAGATTTTTAATGTTTTTAAAAGAAGTTTCGTTTGCTCACCAAGGCTGCATTTATTTAATTGAAAATACAGTAAAAACAGTAATATTGTGAAATATTATTACAATTTAAAATAACTGTTTTCTGTTTGAATATATTTTATAAAGTAATTTATTTCTGTGATCAAAGCTGAATTTTCAGCATCATTACTCCAGTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312016 True 226 lncRNA 0.25 1 4987765 4987990

Neighbor

gene id symbol gene type direction distance location
CI01000069_04981836_04982608 NA coding upstream 4669 4980959 ~ 4983096 (+)
CI01000069_04917103_04918567 ALKBH7 coding upstream 68864 4917103 ~ 4918901 (+)
CI01000069_04791495_04792375 NA coding upstream 195085 4791351 ~ 4792680 (+)
CI01000069_04776672_04785162 NA coding upstream 202333 4775370 ~ 4785432 (+)
CI01000069_04773976_04774606 NA coding upstream 212806 4773976 ~ 4774959 (+)
CI01000069_04990240_04994522 ALDH3B1 coding downstream 745 4988735 ~ 4994869 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 coding downstream 14717 5002707 ~ 5023082 (+)
CI01000069_05033299_05034403 NA coding downstream 45309 5033299 ~ 5034605 (+)
CI01000069_05046565_05048523 NA coding downstream 57977 5045967 ~ 5049408 (+)
CI01000069_05064327_05071992 SLC25A23B coding downstream 76126 5064116 ~ 5072032 (+)
G275008 NA non-coding upstream 1498 4969222 ~ 4986267 (+)
G274950 NA non-coding upstream 14300 4942355 ~ 4973465 (+)
G274958 NA non-coding upstream 22824 4963637 ~ 4964941 (+)
G274997 NA non-coding upstream 71680 4915853 ~ 4916085 (+)
G274993 NA non-coding upstream 79896 4907477 ~ 4907869 (+)
G275047 NA non-coding downstream 51059 5039049 ~ 5039467 (+)
G275048 NA non-coding downstream 51632 5039622 ~ 5039915 (+)
CI01000069_05086587_05092363 NA non-coding downstream 98044 5086034 ~ 5092572 (+)
G275022 NA non-coding downstream 106122 5094112 ~ 5096981 (+)
G274953 NA other upstream 61078 4924467 ~ 4926687 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 429285 4555269 ~ 4558480 (+)
G274619 NA other upstream 854387 4129128 ~ 4133378 (+)
G274603 NA other upstream 1184264 3800023 ~ 3803501 (+)

Expression


Co-expression Network