G275047


Basic Information

Item Value
gene id G275047
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5039049 ~ 5039467 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU312053
ATATCGATACGATACGATACCTCTAATATGAATTTATAGATTTTAACATTTATTCAATTATTGAATTACTAAGAGTAAAATGGGTTATGATACCCACTTAACATTATATTTGAAAGGCATTTTAACATTCAATATGCCTTAATTGCAGTTTATTAGATTATATTTTTGTTTACACATAGTTAAAATGTTTACTTGGTAAACCAAATCTACAAATAAGCCTACTATATGCCTAGCTGAACTATGGTCACTTTAGTAATGGTTCATTTTCATAAGCTGCCAGTGACAGGCTGTTGCACCCATTCAATGCAACATTTGTATTCTGACAGAACATCAATATGAACTTTTAACCTTCAATGTAAATAAATGTAATTGCACAAAGTATGTAGGCTACTATTTCATTTTGTTTATTGTGAAATAAC

Function

NR:

description
PREDICTED: Golgi membrane protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312053 True 419 lncRNA 0.29 1 5039049 5039467

Neighbor

gene id symbol gene type direction distance location
CI01000069_05033299_05034403 NA coding upstream 4444 5033299 ~ 5034605 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 coding upstream 15967 5002707 ~ 5023082 (+)
CI01000069_04990240_04994522 ALDH3B1 coding upstream 44180 4988735 ~ 4994869 (+)
CI01000069_04981836_04982608 NA coding upstream 55953 4980959 ~ 4983096 (+)
CI01000069_04917103_04918567 ALKBH7 coding upstream 120148 4917103 ~ 4918901 (+)
CI01000069_05046565_05048523 NA coding downstream 6500 5045967 ~ 5049408 (+)
CI01000069_05064327_05071992 SLC25A23B coding downstream 24649 5064116 ~ 5072032 (+)
CI01000069_05077178_05084933 ZNF207B, ZNF207 coding downstream 37711 5077178 ~ 5085462 (+)
CI01000069_05086587_05092363 NA coding downstream 46817 5086034 ~ 5092572 (+)
CI01000069_05097987_05099733 NA coding downstream 58520 5097987 ~ 5099841 (+)
G275017 NA non-coding upstream 51059 4987765 ~ 4987990 (+)
G275008 NA non-coding upstream 52782 4969222 ~ 4986267 (+)
G274950 NA non-coding upstream 65584 4942355 ~ 4973465 (+)
G274958 NA non-coding upstream 74108 4963637 ~ 4964941 (+)
G275048 NA non-coding downstream 155 5039622 ~ 5039915 (+)
G275022 NA non-coding downstream 54645 5094112 ~ 5096981 (+)
G275065 NA non-coding downstream 78275 5117742 ~ 5117956 (+)
CI01000069_05150719_05164593 NA non-coding downstream 124313 5148059 ~ 5165388 (+)
G274953 NA other upstream 112362 4924467 ~ 4926687 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 480569 4555269 ~ 4558480 (+)
G274619 NA other upstream 905671 4129128 ~ 4133378 (+)
G274603 NA other upstream 1235548 3800023 ~ 3803501 (+)

Expression


Co-expression Network