G275022


Basic Information

Item Value
gene id G275022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5094112 ~ 5096981 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU312024
ATTACAGCCAAGAACAAAAATGCAATTTATTAATTGTTTGAAAGAAGCTCCATAGTTCAAAACATTTTTTTCGGTGCATGTCAACAATCACATTCTATGAGGAAAGAGAAAAAGAGAGAAAACAAACAAAAACATTAAAAGCCACTGACTTCTTAAAATCTCAGTACAGACATATTCCTTAACATTTAAAATCAAAAGGCAAAAGCAACCCAGTATCTCCATCCACACTCATCCCAGTAACACTCACTCACACAAAGAACACAGACAACCTTGAAAGTCATGGGCTACAAAAAAAACCCCCACAGTGCTTCAGAATGAGACGTTCATTGGTTTAGGAATACACAGCATGGCGATGTACTGTATGTAAGAAACATGAAAAATGGGAAGTAAGATGGGGTCGGTGGGGGAGGGAGACAACAGAGCATATGAGCACAATAAAAGGACACACAAAAAAGAATCCCTCTAATCCCAATGAGAGATGGGTCACAGAGGCTTTAAGAACCCCACCCCCCTTGTGCATAGATCATGATCCGTAAAAACCAGCTTTTTTTTTTCTCTTTAAATCAATCAAATTGATACAGAAACCCTGCCCCCAACCCCTCGTTTTTAGTTCTCATCATGTAATACCCGCCACAAGAGACAGAATGACAAAGAGGAAAGAAATAGTAATGCACAATGGTCCTGATTTCAACAGGAAGGGACCTCATGTTAAGAAAATACAATAAAGATTCAAACATACAGCATTTGTATGTTCTTTCACCGTCTTTTGAACAATCAAAATCATTGATCATTTTGTTTAAAATGTAAAGCAATTTCAATATATAGATTTATATATAAAGCACTCCTTTTAAAGTTCATTAAGAGTTCATTATTTGGTAAATATGTAACTGCTACGGATTTAGAAACAAAGGTATTTTCTTCTTCTGAAATCCATAACCTTCAGTGCTTATGTTTTTTTTTTTTTTTTTTTTTTTTTTCTCTCCGTTATCCTCTTTCTCTAAAAACAAACATTAAATGGCGTGGAGTTGGTACTCTGGAACCCTTGCCTTCCTGAGACATGATCCACTTTTTTGTGTGTGCAAGATAGTGAACAACTATGTCTTCTTTTCTCTCTTTTTAAAAAAAAAAAAAGGATTTTTTTTGCTTTCCAAAAAAAAAAAAAAAAAAAAAAAATACAGGCTTTGATAATCTATGTAAGTAACATTGCCAACATAAATAAAAACAAAAACATGACAACACTGATCAATCCCAGAGTTCTCCAAGTAGCACAATAATCTTCATTCTGTAAAGTGTTTTTGTTATTCATTTGATGGAAGTATATGTCCTTTAGGATTTTCTTTCTTTTCTCTTCTCATGACAATCCCATCGCAACATTTTTTCCTTTAACTTCAGAAAAACATGAAATGTTTGTAAACTGTTGGTGGCCTTGCACAAAGATAGTGAACAAAAACTAGAACAGAAATTAACATTAACAATAAAAAAAAAAAAAAAAAATAGCAAACCAGAAAGGTAGGCACCTCTGAAATGAGTCTTGTAAGAAACTCTTCTCCAGATGTCTATCCAGCTCATCATGGTGTAACATGGGGAGTTACAAGTCCCTCTAAATCAATCTATGGCCACAGTTCTTCAAAAAGATTTTTCCCCACATTTCATATTCATATACTTTTTTTTTGTAGTATTTTGCATTTTTTCTGTTTATAATCTGAAAACAAAAAAATGGTGCAATACTCAAAATAATCCATTTCTTTATCATGGATTATTCCACAATAAAAGCCACTATAAGGTAGATAATCGTATTACAGATAAAAAACACACTTGTTATATTTCTCAATAAGTCCTTGAGTAAACATTAACACATGAATTGTCACCTTGTCCCCTTAGTACTTTAATATCATGTTGTACGATTAGCTGAATGAGGGGAAGCAGACACTCAGTGCAACTCTAATAACAAAGCTAATAACAAATACAATAACAATACACATCCGAATATATTTTTGACTAGCGAACAAAAGACAGACAAAAAAAAAAACAAACAAACAAAAAAAAAAAACACTAAGATGAAACAAAGGCGAAAACAAATCCACTGTAATCACTAGCATACATTGGTTTGAACTCACACACAGGCAAACAAACGCATTCGTCCGTCATACAGTACACGCAACCTTGTGCAAACACTCACATACAACCGATGTCGTTTTGCTTTTTTTTTTTCTTATCTTTGTTTTTTAATTTTTTTTTTTTTTTTTTTTAACTACGTTTTTTTTTCTCGTTCAGTTTGAACTGATGTTATCAAAAAGCTTGGAAGTGTATGAATGACAAAATTATTACAAAAATTTTCACATTACATTATTGGCGCTTCTTTTGATTCAAGTATTTGTGTTTTTTCATTTGTATAATTTTGATATGTTTATGCGTTTATCATCTAGGTAAATTCATGGAGAGAAGGAAACGGGGTTACTCAGGCCTGAAAAAAATGAAAAGTAAATGGAAAAAATAAAAATAAAAATTACAACCAGTTATATACATACACAGGATTTCAGATGTACATGTATATCAACCAGCATGTGCATATTCTAGCCAGGGCCCTAAGAAAGAGGATTTGATTTTCTTAGAGCTCATCTCCACCCAGGCCCTGTTATTTTGTACGATTGAAGCGGACTTCTTATCTACACAAAGTTGCATCTGAGCCGATCTTGTGGAGCTGGGGTACATTAGTCCTACAGATAAGACTCAGTATGCCCACAGTGGAGGACTGGCCACTTTTTTAGCTAGCTAGCTAGCCTGACAGGCATTCCTCTGGATTTTAAACAAGTTTTGGATGGTCGTTTTTTTTTTTCTTTTTTTTTTTTCTTTTTCAATCTGTGGTCTCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312024 True 2870 lncRNA 0.34 1 5094112 5096981

Neighbor

gene id symbol gene type direction distance location
CI01000069_05086587_05092363 NA coding upstream 1540 5086034 ~ 5092572 (+)
CI01000069_05077178_05084933 ZNF207B, ZNF207 coding upstream 8650 5077178 ~ 5085462 (+)
CI01000069_05064327_05071992 SLC25A23B coding upstream 22080 5064116 ~ 5072032 (+)
CI01000069_05046565_05048523 NA coding upstream 44704 5045967 ~ 5049408 (+)
CI01000069_05033299_05034403 NA coding upstream 59507 5033299 ~ 5034605 (+)
CI01000069_05097987_05099733 NA coding downstream 1006 5097987 ~ 5099841 (+)
CI01000069_05150719_05164593 NA coding downstream 51078 5148059 ~ 5165388 (+)
G275048 NA non-coding upstream 54197 5039622 ~ 5039915 (+)
G275047 NA non-coding upstream 54645 5039049 ~ 5039467 (+)
CI01000069_05002707_05021316 CARM1.L, CARM1P1.L, CARM1 non-coding upstream 89801 5002707 ~ 5023082 (+)
G275017 NA non-coding upstream 106122 4987765 ~ 4987990 (+)
G275065 NA non-coding downstream 20761 5117742 ~ 5117956 (+)
G275085 NA non-coding downstream 74885 5171866 ~ 5173310 (+)
G275086 NA non-coding downstream 77501 5174482 ~ 5174981 (+)
G275087 NA non-coding downstream 78137 5175118 ~ 5175383 (+)
G274953 NA other upstream 167425 4924467 ~ 4926687 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 535632 4555269 ~ 4558480 (+)
G274619 NA other upstream 960734 4129128 ~ 4133378 (+)
G274603 NA other upstream 1290611 3800023 ~ 3803501 (+)

Expression


Co-expression Network