G275085


Basic Information

Item Value
gene id G275085
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000069
NCBI id null
chromosome length 5329268
location 5171866 ~ 5173310 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU312106
TGACCCAAAACGCTTAAATTTAAAATTAATTAAATAATAATAATAAAGTATAATAATAAAAAAAAAAAAAAATATATATATATATATATATATATTTGTAATGCTTAAAAAGCGATTTTTGTAAAAGAAAATATCTCCCTTTGCATTGAACTTTGAGCTTCGTAACTTTGCAGACATTGTTTATGCTCAAACAGCAACATTACACACTAACTAAAGTTAAAAAAGGGAAATCATAATCAAGGACTTAATTAAAAAAAATAATAATAATAATAAAAAAAAATAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAATGAGCATTCATTTTAGGCCCAAAACTTTTCCATTTAAATTAATAATAATAAAAAAAAAATCAATTGATCTTAGGGAATGCCCAAATGCATCAATTTGAATAATAAAATAAAAGCATTAATTGTAGTTGATGCTAAAAATGCCTCAATTAAAATAAAATAAAATAAAATAAAATAAAACATTAACTTCAGAAAATGTTTAATAAGTAAGAATGTTGGGATTATTATTTGCCTTATTAAATATCCCTTAAAAGGCCTGCTGTGGTGGCTGTCAGGTTTGGAGAAACGAGCGCCGAGATAGACAGCCTATAGGGCAGCACTAACTCGCCAGCTGAGGCCCTGTGATTGCTGCCATAGCAACGGCAGGCAGGAGCTACACAACCTGGCAAACTGCAAACGTCAATTAACACAGATATGTAGATATCGTGTAGAGGCTGTGAGCAGAGACACATTCAGTTCTGTTAAGTTCTGTTGATGTCCTGGCATTAGACAAGAGCAAATGAGTGAATATAGCACTCAGCAATGACAGAAAAAGTAAAGGACTGTCTGCCTTGTCTAACACGAAGACAACAGTATCTTCTCCAGCTTGTGACTGGATTGGCATTTTGGTGATGAGGTTAAAGCCAAGAAGAGACAGACAAAGATACACCTGCCTCCACTAATCCAGATATTGATCATCATCCTTGTGCAGTCTGTAGATCAATGCAGACAATGAGATGCAGGCTGCAACCTCTCGAGGGACTTGAGAGGAGAGCTGAGACCTGTATTCCAGGCCCTCTCTTACAAACCATCTAGGGA
>TU312105
CATTAATTGTAGTTGATGCTAAAAATGCCTCAATTAAAATAAAATAAAATAAAATAAAATAAAACATTAACTTCAGAAAATGTTTAATAAGTAAGAATGTTGGGATTATTATTTGCCTTATTAAATATCCCTTAAAAGGCCTGCTGTGGTGGCTGTCAGGTTTGGAGAAACGAGCGCCGAGATAGACAGCCTATAGGGCAGCACTAACTCGCCAGCTGAGGCCCTGTGATTGCTGCCATAGCAACGGCAGGCAGGAGCTACACAACCTGGCAAACTGCAAACGTCAATTAACACAGATATGTAGATATCGTGTAGAGGCTGTGAGCAGAGACACATTCAGTTCTGTTAAGTTCTGTTGATGTCCTGGCATTAGACAAGAGCAAATGAGTGAATATAGCACTCAGCAATGACAGAAAAAGTAAAGGACTGTCTGCCTTGTCTAACACGAAGACAACAGTATCTTCTCCAGCTTGTGACTGGATTGGCATTTTGGTGATGAGGTTAAAGCCAAGAAGAGACAGACAAAGATACACCTGCCTCCACTAATCCAGATATTGATCATCATCCTTGTGCAGTCTGTAGATCAATGCAGACAATGAGATGCAGGCTGCAACCTCTCGAGGGACTTGAGAGGAGAGCTGAGACCTGTATTCCAGGCCCTCTCTTACAAACCATCTAGGGACTCTGAAGGAGGCAACACAATGTTTACTGCCAGGATATGATCTCAAAGGAGACATTACACAAATATAGAGCAGCACCAAAAACCACACACTCACAGACACACATTTAATTGCCCAAGAGGGGGTATCAAGCTGAGGGCTTCACTGCACATCCCCACATTTTCACATCAATGGCTGTCTGGAAACCTTAACATCCATCACCAAAACCAGACGATTAGACCCCTCTGTCTCCGCACACACCGATCTGTGGAAATCCATATGCTTGTGAAGATGGTTCAAACAGCAGGTTTGTTTCCCCAAACTGAAAAAGGTGTAAATGACAACCCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU312106 False 1117 lncRNA 0.33 1 5171866 5172982
TU312105 True 1010 lncRNA 0.43 1 5172301 5173310

Neighbor

gene id symbol gene type direction distance location
CI01000069_05150719_05164593 NA coding upstream 6478 5148059 ~ 5165388 (+)
CI01000069_05097987_05099733 NA coding upstream 72025 5097987 ~ 5099841 (+)
CI01000069_05086587_05092363 NA coding upstream 79294 5086034 ~ 5092572 (+)
CI01000069_05077178_05084933 ZNF207B, ZNF207 coding upstream 86404 5077178 ~ 5085462 (+)
CI01000069_05064327_05071992 SLC25A23B coding upstream 99834 5064116 ~ 5072032 (+)
G275065 NA non-coding upstream 53910 5117742 ~ 5117956 (+)
G275022 NA non-coding upstream 74885 5094112 ~ 5096981 (+)
G275048 NA non-coding upstream 131951 5039622 ~ 5039915 (+)
G275086 NA non-coding downstream 1172 5174482 ~ 5174981 (+)
G275087 NA non-coding downstream 1808 5175118 ~ 5175383 (+)
G275035 NA non-coding downstream 11421 5184731 ~ 5185209 (+)
G275101 NA non-coding downstream 12743 5186053 ~ 5186900 (+)
G275108 NA non-coding downstream 20063 5193373 ~ 5193673 (+)
CI01000069_05046565_05048523 NA other upstream 122876 5045967 ~ 5049408 (+)
G274953 NA other upstream 245179 4924467 ~ 4926687 (+)
CI01000069_04556116_04558002 PYY, PYYA other upstream 613386 4555269 ~ 4558480 (+)
G274619 NA other upstream 1038488 4129128 ~ 4133378 (+)
G274603 NA other upstream 1368365 3800023 ~ 3803501 (+)

Expression


Co-expression Network