Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_010553 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007127.7 |
| NCBI id | CM002900.2 |
| chromosome length | 55266484 |
| location | 15786237 ~ 15786804 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0016070 | RNA metabolic process | biological_process |
| GO:0022613 | ribonucleoprotein complex biogenesis | biological_process |
| GO:0090304 | nucleic acid metabolic process | biological_process |
| GO:0006396 | RNA processing | biological_process |
| GO:0006139 | nucleobase-containing compound metabolic process | biological_process |
| GO:0006725 | cellular aromatic compound metabolic process | biological_process |
| GO:1901360 | organic cyclic compound metabolic process | biological_process |
| GO:0010467 | gene expression | biological_process |
| GO:0043170 | macromolecule metabolic process | biological_process |
| GO:0034641 | cellular nitrogen compound metabolic process | biological_process |
| GO:0046483 | heterocycle metabolic process | biological_process |
| GO:0044422 | obsolete organelle part | cellular_component |
| GO:1990904 | ribonucleoprotein complex | cellular_component |
| GO:0044428 | obsolete nuclear part | cellular_component |
| GO:0070013 | intracellular organelle lumen | cellular_component |
| GO:0044446 | obsolete intracellular organelle part | cellular_component |
| GO:0032991 | protein-containing complex | cellular_component |
| GO:0005634 | nucleus | cellular_component |
| GO:0005681 | spliceosomal complex | cellular_component |
| GO:0031974 | membrane-enclosed lumen | cellular_component |
| GO:0031981 | nuclear lumen | cellular_component |
| GO:0043226 | organelle | cellular_component |
| GO:0043227 | membrane-bounded organelle | cellular_component |
| GO:0043229 | intracellular organelle | cellular_component |
| GO:0043231 | intracellular membrane-bounded organelle | cellular_component |
| GO:0043233 | organelle lumen | cellular_component |
| GO:0004386 | helicase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00021792 | True | 568 | lncRNA | 0.53 | 1 | 15786237 | 15786804 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_010552 | CT573793.3 | coding | downstream | 5830 | 15779159 ~ 15780407 (-) |
| XLOC_010551 | CT573793.2 | coding | downstream | 77093 | 15708204 ~ 15709144 (-) |
| XLOC_010550 | has2 | coding | downstream | 398778 | 15369634 ~ 15387459 (-) |
| XLOC_010549 | sntb1 | coding | downstream | 523138 | 15164983 ~ 15263099 (-) |
| XLOC_010548 | mrpl13 | coding | downstream | 688724 | 15052513 ~ 15097513 (-) |
| XLOC_010554 | CT573799.2 | coding | upstream | 26702 | 15813506 ~ 15814501 (-) |
| XLOC_010555 | UBE2O | coding | upstream | 156083 | 15942887 ~ 15988320 (-) |
| XLOC_010556 | ankib1b | coding | upstream | 254839 | 16041643 ~ 16120941 (-) |
| XLOC_010557 | fabp11b | coding | upstream | 361957 | 16148761 ~ 16152199 (-) |
| XLOC_010558 | stmn2a | coding | upstream | 378225 | 16165029 ~ 16182319 (-) |
| XLOC_010626 | CR392024.2 | misc | upstream | 5108308 | 20895112 ~ 20895175 (-) |
| XLOC_010545 | BX324006.2 | non-coding | downstream | 1342848 | 14421800 ~ 14443389 (-) |
| XLOC_010544 | NA | non-coding | downstream | 1368830 | 14416346 ~ 14417407 (-) |
| XLOC_010540 | BX322530.1 | non-coding | downstream | 1618564 | 14093781 ~ 14167673 (-) |
| XLOC_010562 | NA | non-coding | upstream | 479752 | 16266556 ~ 16270435 (-) |
| XLOC_010565 | CR848667.2 | non-coding | upstream | 740171 | 16526975 ~ 16529972 (-) |
| XLOC_010567 | CR848667.3 | non-coding | upstream | 786610 | 16573414 ~ 16573530 (-) |
| XLOC_010568 | NA | non-coding | upstream | 806545 | 16593349 ~ 16604080 (-) |
