CI01000071_00971517_00971823



Basic Information


Item Value
gene id CI01000071_00971517_00971823
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 971037 ~ 972217 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000071_00971517_00971823.mRNA
ATATAAAAAGGTTGAGTAAAAAAATATAAAGTCAATGAATTATTACAACATGTTCATTTTAATTTAATTACGGTTTGATTTTTTCTGATGCCTTTAAATAAGTTTTATAGATTGTGTCTATAAAATGTTGCGTTTATAGCCCTAACAAGTAACTCATTTCATAGTTACAGTTTGACAAAAATCATTAAAAAGAACAATTTGCTCAGCAATCGGATATCACTACATAGGGAAAAAGAACCGCTCCACAGTTTTACAGAGTACAAACCACTTTCTATTAAAAACATTCTGAAAATGATATAAGTTGACAGCATTACTTGGAAATCGGGATTAAACATGAAAAATCACACAGAGAAAAAATAAAAATTAGGAACCATCTGCTGCTCACATCTCTGCACATTATTGGTAAACAGGCACAGAGGGAGTGTGTGTGAGTGTGTTTGTGTGTGTGTGTGCGCATGTTTGGTGTAAAAGCACATAGCAATGCTCCGACACACTCTCATATTCCTCAGAGAGAGAGACAGACACACGCACAGACAGACTACTCCAGCTACACTTCCACAGTTACTGCCCACAGCAGAATCTGATTGGCTGAGACAAGATGACAGCTGGACAGATGTTCCAGAGGAGGCACACATGGGAGGAGAGCTGTCACAGCCGGTCTCACAGACGGATCCCATGGAATCGGCGCGGAGCCGCTTGAGCGAGGGACAGGATGAGACGACAGAACTCTAGAACACATCCAAAATCACATCCGTCGACTGCAATTTAATACGGCAGTCATGCTGATTTTAATGTGAAATGCAAATCAAATGACATGATGGCTTACTTTAAAACTCGCCCTGCACTTACGTCAACATCTAATTTGTTTCTGATCTATGAACCGTCAAAGAGTTCAGACTGATAGTTATCAATAATTAAGCCATATCCTCTAACCATTACCTATCAATATAAATAACTTGTGTACATTCAAACACCAGACAGATAACAGATCAGCAAAAGTGCCCAACAAAGCATAGTAAACCATTACCAGTTCAAAGTTCTGCGTTTCTAAGACTAACCAGACAACTGCTAGGCCAAGCTACACTCAGAATGAGCCTTAACAAACAGAATTGTGAAACAGTGTATA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000071_00971517_00971823.mRNA True 1126 mRNA 0.39 2 971037 972217

Neighbor


gene id symbol gene type direction distance location
CI01000071_00965582_00968758 NA coding upstream 1676 965001 ~ 969361 (+)
CI01000071_00923006_00927912 NA coding upstream 42549 922752 ~ 928488 (+)
CI01000071_00880705_00897817 TRPV4 coding upstream 72592 880705 ~ 898445 (+)
CI01000071_00867024_00871868 NA coding upstream 97718 866841 ~ 873319 (+)
CI01000071_00825247_00853236 GIT2A, GIT2 coding upstream 117283 824939 ~ 853754 (+)
CI01000071_01086147_01088260 NA coding downstream 113930 1086147 ~ 1088399 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 140931 1113148 ~ 1116722 (+)
CI01000071_01139373_01146663 FOXN4 coding downstream 166847 1139064 ~ 1146678 (+)
CI01000071_01374449_01376813 NA coding downstream 401779 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 408341 1380558 ~ 1388948 (+)
G280505 NA non-coding upstream 28032 941395 ~ 943005 (+)
G280479 NA non-coding upstream 66173 904632 ~ 904864 (+)
G280478 NA non-coding upstream 67024 903783 ~ 904013 (+)
G280477 NA non-coding upstream 67863 902867 ~ 903174 (+)
G280449 NA non-coding upstream 71427 898818 ~ 899610 (+)
G280537 NA non-coding downstream 38315 1010532 ~ 1010771 (+)
G280558 NA non-coding downstream 82581 1054798 ~ 1055116 (+)
G280560 NA non-coding downstream 86772 1058989 ~ 1059265 (+)
G280561 NA non-coding downstream 87464 1059681 ~ 1059906 (+)
G280563 NA non-coding downstream 93239 1065456 ~ 1065967 (+)
G280443 NA other upstream 48941 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 167720 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1832427 2815127 ~ 2835525 (+)
G282080 NA other downstream 2083867 3056084 ~ 3056531 (+)

Expression



Co-expression Network