CI01000071_01436960_01442221 (POLI)


Basic Information

Item Value
gene id CI01000071_01436960_01442221
gene name POLI
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1436960 ~ 1442520 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_01436960_01442221.mRNA
ATGGACACGGACGAGGAGGGAGACAATAATGACTGGGATCGCAGCTTAGAGTCAGACATGCTGGAGACAGAGGGAAGTATCATTGACAGAGTTACTTCCATATCTCAAAGAGTGATTCTGCACTTTGACCTGGACTGTTTCTATGCACAAGTTGAGATGATCCGAAATCCAGCCCTCCGAACCAAACCTCTTGGGATACAGCAGAAGTACATTATTGTGACATGTAATTATGTGGCGAGAGAATGTGGCGTGACCAAGCTGATGTCAGTGACTGATGCAGTGGAGAAATGCCCAGAGCTGGTGCTAGTCAAAGGAGAAGATCTCACCCATTACAGAGAGATGTCCTACAAAGTCACCGACTTGCTGATGTCATACTGCCCTCTAGTGGAGAGATTGGGCTTTGATGAAAACTTCATGGACGTTACAGAAATGGTGGAGAGAAGACTAAAGGAGACCCGTATTTCAGATCTCTCCTTCAGTGGACACATATATAAACACGAATGTGTGGCAGTTGATGAGGAAAACGCCCGTCTGGCTGTCGGCTCTGTGATAGCAGCTGAGATGAGAAAAGCCATCTTCAGCATGCTGGGACTAACGGGCTGTGCTGGCATCGCTAGCAACAAACTCTTGGCCAAGCTGGTGTCAGGCACCTTTAAACCCAACCAGCAAACCGCCCTCCTGCCGTACAGCACTGCTGAGCTCATGAGCAGCCTTACAGGACTAATCAGAGTGCCTGGGATTGGTTACAAGACACGTGAGAAGCTAAAGGCTCTGGGTCTGGTCAGTGTGAGAGATCTACAGTTATGTCCTCTGCCTGACCTGGTGAAAGAGTTTGGTGAAGTGACCGCTAAAAGGATTCAAAACCTCGCCTGTGGCATCGATGAGTCTCCAGTCACGCCGGCAGGTCCTCCTCAGTCTCTCAGCGACGAGGACTCGTTCAAGAAAATTTCAACATTAGAGGAAGTTGTGAAGAAAACTGAGGAACTACTCACCAGCCTGACTGAGAGGATGCACAAAGACGGCAGGCAGCCGCACACATTCAGGCTAACAATTCGCCGATACACAGTCACTAATCGCTGGTTCAGTCGAGAGAGCCGACAGTGTCCAATACCCAACCACATCGGGCTCAAGATCACATGTGGAAACAGCGAGGCTGTGCCCCAGTTACTGTCATTGTCAGTGAAGCTCTTTCATAAAATGGTGGACACACGTGAACCGTTCCATCTGACCCTGCTGAATGTGTGTTTTAGTAACCTGCAGGCTAAAAGCTCCAGCAAGAGCTCCATCGCCTCTTTCTTCACACAGAAATCTCCTTCAACACAAATGACGTCTCAACAGCAGGTGGAACCCGATCTCTGTGAGTCTGTTGCAAATTCCCAGTTTTCTCAGGCAGATGTTTTACATAAAGAAGATAAAACATGGAACAGCATGAAACCAATAAAACACACGTCCATATCTCCAACCCAAGAATCACAATCACAGCCACCTGTAATCAACCCCAAATCTCCCAGGCAGCCTGTTTTTGAGCACTCACGAGTTACAAACATAAACCTTAGAGAGTCTTGCATGAGCAACGTTCCAGAGGAGACAATGTGTTCCAAGCTGCCGCCAGGTGTTGATCCGGAAGTATTCAAACTCCTTCCTGAACACATTCAGATGGAGCTGATTTCCAGTTTTCAAAATGAAAACTCTGCACAGCTTATTTACAGACCCGCTGACACATCTTCCGAAGATGTTGACCCAGCAGATCATTTCACGTTGGCCTTTAACCAACCAAGAACACCGGAGCCCTGTGAGTCAACACTGAATTATAGCAGAAATTCTGCTTCTCATAACCATAACCTCATCAAGACCTTGCCATCTGCTCAGTCCACCATTGAATTACATTCTGGGCTCATCAAAGACACAGAAAGTCATGATACCCCACCCACCACTGAAGCACCACAGTCAGATATCCCTGCAAATGTGGACCCTTATGTATTCTCACAACTTCCTGCTGATGTGCAAAGGGAGTTACTGACAGAGTGGAAACAGCAGAGACCGGTCCTCAAAATCCCATCCAAACACTCGCATAAAACCTCCAATGCCAGAGACAAGAAGAATGCTGCTAAAGGCAGCCAGTGTAACAACATACTGAAATACTTCAAACCCAACTGAGGACAGAAACACCTTAAGTGTTGTTTATAAAATCTTTTTTTTTTTTTATAAATGTTTAAAAAAAGTATGTAAACCATATCTTTGTAATCAATAGTACAGAAATATGTAAATTCTGTCATGATTTGCTCACCCTCATGACAAACCTGTATGACTTACTCCCAGGGGATGCTGGGAAACAAGGTCATCCTGGCTTGGATTAATTAGGGTGAGTAAATCATGACAGAATTTTCATTTTTCTGTGAACCATTTTGATAAATTCATTGTATACACAAGAGCAGAACAGCTTGTTTACATATAAA

Function

symbol description
poli Predicted to enable DNA-directed DNA polymerase activity. Predicted to be involved in translesion synthesis. Predicted to act upstream of or within DNA biosynthetic process and DNA repair. Orthologous to human POLI (DNA polymerase iota).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_01436960_01442221.mRNA True 2456 mRNA 0.45 10 1436960 1442520

Neighbor

gene id symbol gene type direction distance location
CI01000071_01416847_01427453 ANKLE2 coding upstream 8162 1416414 ~ 1428798 (+)
CI01000071_01392755_01411463 GOLGA3 coding upstream 24279 1392755 ~ 1412681 (+)
CI01000071_01380924_01388813 RANBP1 coding upstream 48012 1380558 ~ 1388948 (+)
CI01000071_01374449_01376813 NA coding upstream 60105 1373996 ~ 1377670 (+)
CI01000071_01139373_01146663 FOXN4 coding upstream 290282 1139064 ~ 1146678 (+)
CI01000071_01443137_01445109 BRI3BP coding downstream 617 1443137 ~ 1445166 (+)
CI01000071_01452292_01490229 AACS coding downstream 8044 1450564 ~ 1490912 (+)
CI01000071_01514470_01525572 NA coding downstream 71795 1514315 ~ 1528807 (+)
CI01000071_01580310_01581199 NA coding downstream 137790 1580310 ~ 1581205 (+)
CI01000071_01677282_01720849 NA coding downstream 234762 1677282 ~ 1720849 (+)
G280676 NA non-coding upstream 65981 1357275 ~ 1370979 (+)
G280662 NA non-coding upstream 130818 1305898 ~ 1306142 (+)
G280646 NA non-coding upstream 154537 1280535 ~ 1282423 (+)
G280628 NA non-coding upstream 193440 1243296 ~ 1243520 (+)
G280695 NA non-coding downstream 23728 1466248 ~ 1517469 (+)
G280705 NA non-coding downstream 53843 1496363 ~ 1496634 (+)
G280740 NA non-coding downstream 288611 1731131 ~ 1731351 (+)
G280745 NA non-coding downstream 298371 1740891 ~ 1742345 (+)
G280443 NA other upstream 514864 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 633643 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1362124 2815127 ~ 2835525 (+)
G282080 NA other downstream 1613564 3056084 ~ 3056531 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030945 poli coding NC_007116.7 CM002889.2 18912950 ~ 18924834 (-)