CI01000071_01452292_01490229 (AACS)


Basic Information

Item Value
gene id CI01000071_01452292_01490229
gene name AACS
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1450564 ~ 1490912 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_01452292_01490229.mRNA
ATATAAATAGTGATGAAATTGGCCTTGACAACCATTGACTCTGCAACAGTAGGCTATTCAGCAGGTCTTTATATACTATAATACCTTCCTTTGGTGCTAAAATGTTTAGAAAAATAAACAGACTGCATAAAATTCAAACAAAATGTATGGAAAATATAGTACAGAGACACCTTTCACGTAATGTTTTCCTTTCCTCATCAGGTCATGTTGCAGGCAGGCTGCAGGCTCTGGATTGGGCACACCTCTATATGATCCCTTCTTTTATTGGCTGAGCGCTTCTGTGGGCCGAAATGGCGGAACGGCTGTGTGACTTCTGATTGGTTCCCTTCTCCGTCTGTCCATGTTGCTTTTGCTCGTGCTGCGGTCTCGGCTGATGTGAGGCCAGCTTTAGGAGCCAATGGAATTAAAGAAATGCTAATTGCGGGGCAGTCAGATATTCCTCCGCCAAAGCCTGACAGTAATGCTTTATCTAAGTCAGTGGTCAAGTATTTTATATTCTATTTTGACAAGATATATTGTAACACTTTAGAGGCGGTCAGAATTTTAAAATTGAAACTATACATATTTCATATCATTAGGCCTATCGTTAAATATAGTTTAATCACGGTAAAATCTGAGATTCAAATAACTGACTGAAGACTTATTTATGATCCATTGTTTTTTTTTTTGTTTTTTTTTGTTTTTGTTTTTTTTTATGACCCGTATCAGTTGACAGCACTTCATCGCTTTATGAAGTTTCATAAAAAAAAGCCTTGATGCCCCATCCGTGAACAAATCGTTCTTTTGAGTCGAATCTTTTCAATCAAACAGTTGAAACGGTTCACAAACACCGCTCTGAATGATTCGTTTAAAAAAGGGACTGAATCTATATATTTTTCTTTACTGATTTTCTTGCTGTTATTATTATTATTTTGTATTATTGTTATTTTTATTTAATTGTTGTGTGTTTTGTTACTGAATAAAGCATTTAAAAAAGGGACTGAATCTGTCTGAACGGTAATCGAGTCAGTGAGTCAGATTACTGCAACAAAGTGAACTGGGACACATTAAATGACAACAAACACTCTATTGCTATTTGAATGGATAGTAAAGGATTGCTATTTAATTATTTGAAATTAATTTTAAAACGTTGTATAGAGATTATGTGCTCATACGTGTTTGTTTAAACGTTTAACAGCAAGTCACAACGGGATGTCAGGGACGAAGATGTGACGTTTTGTTGTCATGACGTCGATAAATAAACTGGTTCTCAGAAATGAACTGTTCGAAAGAACCGATTAGCATAAATAAGTCGGACTTCCTTCTCACCACTATCTGATAGATGAAACAGATACGAGATACCTCTTACATATGCAAACGCTGGTCTTAATTAAATATGCAATCTTAATGAAATATTTATTAATAAATAAACACTAAATTGTTCCTGAATCATCAACAATTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAAAAACCTAAGTACTACATGAGCAGCGGAAGAACATGTGGAGATTGGCAGGGTGGTGTGCGGTTACGCGGTAGGCGGAGCTTCCGCGGGTTGATTATGTGCGGCTGACGCTCGGAAATGACCCATGTGTCTGAGTTGCACCAATACACGATCACCGAATCGGCTCGTCCAACTCCAGTAGTGCATTTCTTCCAGTCTTTATAGGTTATTCACGACATACCGGCGCGTGTCATCCGATCATGTCTAAAGACACGGAGGCCAACAGCGAGGAGATTATGGAGTCGAAGGTGCTCTGGTACCCGGACTCTAAACTAAACACACAGATGGACCGATTCCGGACTCAAGTGAACCGGGACTTCGGGTTGAATCTGGCTAACTATAATGACCTGTATCAGTGGTCTGTGGACAGTTATCCGGAGTTCTGGGCGAAGGTTTGGACATTCTGTGGCATCACCTGCTCAAAGATGTATGAGGAGGTGGTTGATGTGTCTAAAAGGATATCAGATGCACCTGAGTGGTTTAAAGGCAGCAGACTGAATTATGCAGAGAACCTGCTCAAACACAAAGACCAGGACAAAGTGGCTCTCTATGCTGCAACTGAGGCGAATGAGGAGATTGTCAAAGTGACTTACGGAGAGCTGAGGCGTGATGTCGCTCTCTTCGCTGCCGCCATGAGGAAGATGGGCATCAAAACTGGAGACAGGGTCGTAGTAAATCTTGATTGCAGCCTAGCCAATCAGCCGCAACTTTTGCTTGCTGCTAAACTTTACTCATCTTCAGGATATCTGCCCAATGGGATTCATGCTATTGAGGCCATGCTCGCTGCTGCAAGTATAGGTGCCATCTGGAGTTCAACCTCTCCAGATTTTGGTGTCAATACATGCACACACTTTACCTCTCGCTACTGCCACTCTGTGTCTCTCTCACATACACTCTCCAACCAGAAGATTAAAGGAGTGCTAGACAGGATTTCCCAGATCCAGCCCAAGTTGATATTCTCAGTAGCAGCTGTTGTGTATAACGGCAAGCAGCACGACCATATGGAGAAACTCCAGAATGTTGTGAAAGGTCTCCCTGACCTGAAGAAGGTTGTGATAATTCCATACGTTCGCTCTCGACAAGAGACGGACCTCTCCAAGATTCCCAACAGTGTGTTCCTGGAGGACTTTTTGGCCACAGGTAAAGAAGGGGATCAGGACCCTCAGCTGGAGTTTGAGCAGCTGCCCTTCTCTCATCCTCTCTTCATCATGTACTCCTCTGGCACCACAGGAGCTCCCAAGTGCATGGTGCACTCTGCTGGGGGCACTCTCATCCAACATCTTAAAGAACACATTCTCCATGGCAATATGACCTACAATGATGTCATCATTTATTACACTACGACGGGCTGGATGATGTGGAACTGGCTGGTGTCCTCTTTAGCCGTTGGGGCTTCTGTGGTCCTGTACGATGGCTCTCCTCTTATTCCCAGTGCCAATGTGCTCTGGGACCTCGTAGACCGTCTGGGAATCACGATTTTTGGGACTGGAGCAAAATGGCTGTCTGTGTTGGAGGAGAGAAATCTGAAACCAGCAAACACACACAACCTGCAGACGCTTCACACACTCCTGTCTACAGGATCTCCACTGAAGCCTCAGAGTTATGAGTATGTGTACAGCTGTATTAAGAACAATGTGCTGCTGGGATCCATATCAGCATGTTTCTCTCACACACCACCTGTGCCCAGTTTCTCCCTGCGGTTTCACCAGATGAGCTTTGCTCTCATGGCAGGTGGCACAGACATCATTTCATGCTTCATGGGTCAGAACATGACGGTGCCCGTTTACAGAGGAGAAATTCAGGCCCGAAATCTGGGCATGGCTGTGGAGGCCTGGAACTGTGAAGGTAAGCCTGTTTGGGGAGAGAGCGGCGAGCTGGTGTGTTTGAAGCCCATCCCGTGCCAGCCCACTCATTTCTGGAACGACGAGAATGGCAGCAAATACCACAAAGCCTACTTTTCCACCTTCCCAGGAGTCTGGGCCCATGGCGATTACTGTAAGATAAATCCAAAAACGGGAGGAGTCGTCATGCTGGGAAGAAGTGATGGAACTTTAAATCCTAATGGTGTTCGGTTTGGGAGCTCAGAGATTTATAACATTGTGGAAGCCTTCGAGGAAGTGTCCGACAGTCTTTGTGTCCCTCAGTACAACAGTGACGGAGAGGAAAGGGTGATTCTGTTCCTGAAGATGGGACCCAAAAAGACCTTCAGTCAAGAGCTAGTAGGAAAGATCCGCAGCGCTATCAGAATAGCTCTCTCTGCCCGGCACGTACCAGCAATGATACTGGAAACCAAAGACATCCCGTACACTATCAGCGGAAAGAAGGTCGAAGTTGCAGTAAAGCAGGTGATCGCAGGTAAGGACGTCACTCAGCGAGGGGCCTTCTCAAACCCAGACTCCTTGGACCTCTACAAGAACCTGCCTGAACTCCAAAACTTCTGAACAACTGCATGAGGTTCATCTGAACTCCTGAAGGTCCAGCGCTTCTGGGCCCCCTTTGAAGGGTTCAGATTCTCTGGACACTGTTGGAAAATCTGGAGGAATTTATAGAGCTTTCAAACATCAAAGCTTTTCTGCACGTTGTGGCACCTGCTCAAACTCAGCTACCCATAGGAACTGATGAAGTCTGAACACACCACACTTCTTCAAAAGTATAACCGGGTTCCTCTCGGGTAGAAAGTTGAGAATGCCATTTTATGAATTTCCAACTTGGATCTTAAAGGGACATTTTATCTGCTTCTGTAATTGCGTCCACCAAGCGTTATTCCCAAGAGATGTACCGAACTCAAACTATTTCCTGAATCTGGTATCTTAATTGTTCGAGATATGTCAGTCCCATATTTTACCTCTTGTATTTTGATACAGTGTCACTTTAACCTTAACGAAGCTGTAGGAAAATCTGGCCATGTATGTTTTGAGGCTTTAAAATTACACTATTTATGCTCATATACCTGTATGAGTCAAATATACTGATATGTTACTGAATGTTGTGGATTTAAGGATAAGCCATTTCTCCTGTACGAATACCGACTTCTTGGGTAAAACCAACTGTTTGCTGGAACCTCTAACTTTATCAGGCAAAGTTTGTGCCCAGCTTGGTACCTTAATTACAAAATGTTGCCGTA

Function

symbol description
aacs Predicted to enable acetoacetate-CoA ligase activity. Predicted to be involved in positive regulation of insulin secretion. Predicted to act upstream of or within fatty acid metabolic process. Predicted to be located in cytoplasm. Predicted to be active in cytosol. Is expressed in liver; nervous system; neural tube; and optic vesicle. Orthologous to human AACS (acetoacetyl-CoA synthetase).

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K01907 AACS, acsA; acetoacetyl-CoA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_01452292_01490229.mRNA True 4652 mRNA 0.44 21 1450564 1490912

Neighbor

gene id symbol gene type direction distance location
CI01000071_01443137_01445109 BRI3BP coding upstream 5398 1443137 ~ 1445166 (+)
CI01000071_01436960_01442221 POLI coding upstream 8044 1436960 ~ 1442520 (+)
CI01000071_01416847_01427453 ANKLE2 coding upstream 21766 1416414 ~ 1428798 (+)
CI01000071_01392755_01411463 GOLGA3 coding upstream 37883 1392755 ~ 1412681 (+)
CI01000071_01380924_01388813 RANBP1 coding upstream 61616 1380558 ~ 1388948 (+)
CI01000071_01514470_01525572 NA coding downstream 23403 1514315 ~ 1528807 (+)
CI01000071_01580310_01581199 NA coding downstream 89398 1580310 ~ 1581205 (+)
CI01000071_01677282_01720849 NA coding downstream 186370 1677282 ~ 1720849 (+)
CI01000071_01909999_01929819 NA coding downstream 418166 1909078 ~ 1930261 (+)
CI01000071_01966426_01969786 NA coding downstream 475181 1966093 ~ 1969786 (+)
G280676 NA non-coding upstream 79585 1357275 ~ 1370979 (+)
G280662 NA non-coding upstream 144422 1305898 ~ 1306142 (+)
G280646 NA non-coding upstream 168141 1280535 ~ 1282423 (+)
G280628 NA non-coding upstream 207044 1243296 ~ 1243520 (+)
G280705 NA non-coding downstream 5451 1496363 ~ 1496634 (+)
G280740 NA non-coding downstream 240219 1731131 ~ 1731351 (+)
G280745 NA non-coding downstream 249979 1740891 ~ 1742345 (+)
G280772 NA non-coding downstream 293704 1784616 ~ 1784816 (+)
CI01000071_01374449_01376813 NA other upstream 72894 1373996 ~ 1377670 (+)
G280443 NA other upstream 528468 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 647247 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1313732 2815127 ~ 2835525 (+)
G282080 NA other downstream 1565172 3056084 ~ 3056531 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) AMCG00018613 aacs,LOC107672615,LOC108255473 coding CM030135.1 CM030135.1 15379743 ~ 15418462 (-)