CI01000071_01580310_01581199


Basic Information

Item Value
gene id CI01000071_01580310_01581199
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1580310 ~ 1581205 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_01580310_01581199.mRNA
TGTGTGAGAGCAGGGGTGGAGGTAGTGATCTCGTGCCCAGGTTCTCCTCATCCTTGCCCACGTACCTCCCAGTGTCCTGCCAACTGCAAGGTGCAGAGTCATCCTTCTTTCTTCGGGAAGCCACACAGGAAGTGATGCGTAACGGGAGCTTGCAGACACGCAGTGAGCCTCTCTTTCTTTACTTGCCCGATGCTGGCCCTGCTCCCCTGTTGTCGGTCAACTGTAGCTATGGCAACCTCACTGCAGAGGCGCCAGTACCACCAGAGCTCCTCCAGGGGGCGCTTCCACGTTCCTTCCACACCTCTACACACCTGACGCTGGGCTGGAAGGTGAGAGCGCACCTGGTGAGCAGGAGGATAGGAGTTGATCGACCTCAAATACAGGTGTTGTTTTACCTGGCAGGCCGCAGATGGGAGGATGTGGATCCTCCTGCGGAACTACTCCCGTGTATCCGTGTCGTCGGGATCCGTGATCCAGGGGAAGGTTCCGTGTCAACTGCCTGTCGACTGGAGGGAAACATGGGGATCTGTGTAGCCCAGCTTGACATCCCTACAACCTGGTTCAATGCTCCTCCACCACGTAGACGCACACAGGAACACGTTCCCATCACGGTGGAGTTGCACTATTCCATCCTTTCCCCAGAGACCCTGGGAAAAGAGTGCATAGCCGGTAGGGCGCAAGGAAAGTCTGTAGGGCAAGAAGGAGATATGCAGAGGATTGGGACGGTGACTCTCGCCACTGGGGACAACAAAGCGCCCAGAAACCGACTTAGACTGGATGGAGACGTTGAGATTCTGGCACCCCCCAGCCCAATTAAACAGGGACAGACTGTGGGATTTCAAGTACTAATGAATACTGCTGCCGCCACTGAGCAGTTTACACTGAGGTAGGACAAA

Function

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K17599 TMEM132; transmembrane protein 132

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_01580310_01581199.mRNA True 896 mRNA 0.56 1 1580310 1581205

Neighbor

gene id symbol gene type direction distance location
CI01000071_01514470_01525572 NA coding upstream 54715 1514315 ~ 1528807 (+)
CI01000071_01452292_01490229 AACS coding upstream 89398 1450564 ~ 1490912 (+)
CI01000071_01443137_01445109 BRI3BP coding upstream 135144 1443137 ~ 1445166 (+)
CI01000071_01436960_01442221 POLI coding upstream 137790 1436960 ~ 1442520 (+)
CI01000071_01416847_01427453 ANKLE2 coding upstream 151512 1416414 ~ 1428798 (+)
CI01000071_01677282_01720849 NA coding downstream 96077 1677282 ~ 1720849 (+)
CI01000071_01909999_01929819 NA coding downstream 327873 1909078 ~ 1930261 (+)
CI01000071_01966426_01969786 NA coding downstream 384888 1966093 ~ 1969786 (+)
CI01000071_02000540_02048898 NA coding downstream 419180 1993072 ~ 2049583 (+)
CI01000071_02063411_02065517 NA coding downstream 482206 2063411 ~ 2065565 (+)
G280695 NA non-coding upstream 62841 1466248 ~ 1517469 (+)
G280705 NA non-coding upstream 83676 1496363 ~ 1496634 (+)
CI01000071_01380924_01388813 RANBP1 non-coding upstream 199407 1380558 ~ 1388948 (+)
G280676 NA non-coding upstream 209331 1357275 ~ 1370979 (+)
G280740 NA non-coding downstream 149926 1731131 ~ 1731351 (+)
G280745 NA non-coding downstream 159686 1740891 ~ 1742345 (+)
G280772 NA non-coding downstream 203411 1784616 ~ 1784816 (+)
G280781 NA non-coding downstream 226871 1808076 ~ 1808304 (+)
G280783 NA non-coding downstream 230418 1811623 ~ 1812051 (+)
CI01000071_01374449_01376813 NA other upstream 202640 1373996 ~ 1377670 (+)
G280443 NA other upstream 658214 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 776993 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1223439 2815127 ~ 2835525 (+)
G282080 NA other downstream 1474879 3056084 ~ 3056531 (+)

Expression


Co-expression Network