CI01000071_03016024_03022596



Basic Information


Item Value
gene id CI01000071_03016024_03022596
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3014670 ~ 3022994 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000071_03016024_03022596.mRNA
CTATAAAATCATATGAATATATTGCACATTCCCAGTTAATATCAGACTGATATGGTCATAAACGGTTAAAACAGACTCAGCTCTGTTAAACACACTGTACATGTTTAAGTCCAATCCAAATTCCAAATGCCTTCCCCAAAAATCACAACAGAAAATGTGGAAAAAGTCTGCAGAAAAGGCTTGCTCATAACGGGACCTCTTAAAGCAAATACAACCTATATCAAACACCGGGCAAATGAGACATGAATCAGGACCATTCAAACAAACAAACATCTAAACCTCTTTTCCACTGTGTGCCAACGAAGCCCGATCCCTCCATTATGTGCTACAGCTGCCCAGGCAGTCAGACCCCCGCTATCAGTCTTAGGCAGCATTATGGAAACATTGTTGAGGAATGGGATGAATGGTATGGCTTTGATCTCTGGCCGTTGACCTGGCAGGCCCTAGTCCCTCCTCCACGTATGCGGCGGCCCACATCAAAACCTTTCGCTCAGGGAGATCAGCTGCACAGCCAGACCTAATCCCTGCACGAATTTAATCAGCCATCTCAACGACTCACATTACGCTTTTTAATTAGGAAGGAGTCATTGCTTCGGAATCACACCCAGCCGGAGTACTCGCACTGTGTGGACCTCTAAGTCCCTGTGAGCTTATGTCAAATATAAGATTTCACCTTAGGGCGAATAGAGAGATTTTTCTCTTTGACTCACTTTTTAATAGACTGCAACTCCCTTCCGCCGAAGAATAGGTTAGGCAAAGTCCAAGTGGCCATTCCAGTCTACATTCCCACCAATTCTTGATTAAGAAGTAGGCTAAATAGAAGTAGACTAAATTAGATTTTTTTTTCTCTAAATCATGCAGTCCTAAGGAACAAATGACACAGATTCTCAAATTTTGGAAGTTTTTGGTTGCTTCTTGAACTAATACAGATATTTTTGTATCTCTTTTAGTCACCTTCCACCCTTTGAACAAAGCTGCAGCGGCAGCTATTTGCAGCAACAAGCAAAATCTGTTCCAACACAAGCCTCTATTCACAGGGCCAGCATCCATCAAAGGAGTGGGGGGGGGATCCCATCCTTTCCAACCCATCCAGAAGTACTACAAAAAAAAAAAAAAAAATCAAAAGGCCTCTACAACACCCAAGGCCAGTCATTTTAGTGGATGCCGGATGGAGTGGCCAGTGCCAAAGTGACCATATCAAAAGCCCCCGGGGCCCTGAGTCACCCCCTACAGTGATCAAACAGGGACCATCCCCATAGAGAAAGGAGGGGGGTGTGGGACCAATGACGAGTCAAAGAAAGACACAAACTGATAGAGAGACCAGCAGAGAGGGAGAGCGGGACAGAGAAAACAAATGAGGCCCAGGGACGAGAAACCGACCCAAGGCAAACAGCGAGGGGTAGAACACAAAGACAGCGGTTGCCTGGGAGAGAGGGGCTCGCAGCAGAAACTATGTCCAGATCAAGACACTCGCCGCTGGGCAGGACTGAGTGAGCTTATCAGAGGCTCATCTCCAGCATGCCAAGAGGGGCACATACCATTCGTTTTGGCCCATCCTGTGAGCTCTCTCGTTGGCAAGAGTGGCCCTCTCAGCCGCTTTGATGTGCTGATGGTTCGGTGGCTCGCTCTGCAGCTGGTGATAGCATCAGAGCAGGCCTCTCTTGGGCCTGTGTGCCATGCTATGATAACAGGAGGGTTGATAAGAGGAAATACAAGCTGTCATGAGGAACACATTGAGTTGGATGCCAAGCTGACAAATCAGAGGGGCAGCAAAGATGCAGAGAAAAACAGAGATAGAAGACAATGCAGAGGTGACAAAGCAATGCAAATGAGGAATAAAGACCCATGAAATAGTTTGTCTGACATGTCAACATGTGTGTAATTTTTCAGACTATCAATGCCACAAATCTAATCAACACCCGATGCATAGAACCAAGTCACAACACTAAAAAACCAAACAAAAAAAAAAGTTAAAAAAAAACTACATTTTTCCATTATAACTAGATGTACATCACAATCAGTCTTTGTGGGACTTGAACCAGCAACCATCCAGGCAACCAAATCTGAGCTTTACCTACTACCTCAAACCATCCAAAGAGGCTCACAAGCATTAAGACTAACAAGCTAACATGAGGTAAAAAGAAACGCCAGTTTTAACGTCGCTCCAGAGATTTTCTCCCTAACGTCCACAGCAGTTCAGCTTTTCAAGCTAAATCTAAAAGGACACCGAGGTAACCTGAATCTGCA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000071_03016024_03022596.mRNA True 2247 mRNA 0.45 2 3014670 3022994
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Neighbor


gene id symbol gene type direction distance location
CI01000071_02960341_02966088 COQ5 coding upstream 48224 2960037 ~ 2966446 (+)
CI01000071_02927971_02953988 NA coding upstream 60503 2926649 ~ 2954167 (+)
CI01000071_02838185_02847470 NA coding upstream 167059 2838148 ~ 2847611 (+)
CI01000071_02815324_02834097 NA coding upstream 179971 2815127 ~ 2835525 (+)
CI01000071_02770135_02797577 PIWIL2 coding upstream 216897 2769237 ~ 2797773 (+)
CI01000071_03062277_03064334 XBP1 coding downstream 38844 3061838 ~ 3064706 (+)
CI01000071_03108610_03108994 NA coding downstream 85450 3108444 ~ 3108994 (+)
CI01000071_03329447_03356262 TAOK3A, TAOK3 coding downstream 306453 3329447 ~ 3357152 (+)
CI01000071_03361493_03387786 NA coding downstream 338499 3361493 ~ 3390180 (+)
CI01000071_03414821_03439810 GNB1L coding downstream 391827 3414821 ~ 3439810 (+)
G282014 NA non-coding upstream 213889 2800542 ~ 2800781 (+)
G281992 NA non-coding upstream 253616 2760821 ~ 2761054 (+)
G281989 NA non-coding upstream 259193 2755218 ~ 2755477 (+)
G281988 NA non-coding upstream 265221 2749220 ~ 2749449 (+)
G282075 NA non-coding downstream 28126 3051120 ~ 3051524 (+)
G282076 NA non-coding downstream 28787 3051781 ~ 3052472 (+)
G282082 NA non-coding downstream 35320 3058314 ~ 3058519 (+)
G282089 NA non-coding downstream 45611 3068605 ~ 3068899 (+)
G282093 NA non-coding downstream 49026 3072020 ~ 3072255 (+)
CI01000071_01374449_01376813 NA other upstream 1637000 1373996 ~ 1377670 (+)
G280443 NA other upstream 2092574 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 2211353 791346 ~ 803317 (+)
G282080 NA other downstream 33090 3056084 ~ 3056531 (+)

Expression


CI01000071_03016024_03022596 Expression in PRJCA010000

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CI01000071_03016024_03022596 Expression in each Bioproject

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CI01000071_03016024_03022596 Expression in each Sample
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Co-expression Network