CI01000071_03414821_03439810 (GNB1L)


Basic Information

Item Value
gene id CI01000071_03414821_03439810
gene name GNB1L
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 3414821 ~ 3439810 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000071_03414821_03439810.mRNA
TCAGGTAAAGGTGCGATCCATGTCTGGAACCTGACCACTAGGAGAGCAGAACATGTTTTAGAGAGCCATGCTGGGAACTCTGTTATCTGGCTTCACACCTTCAAAGACAGCAGCAGCAGCCTCATCAGTCAGGGTCGGGACATGCGGGTGTGCGTGTGGGATCTGTCTGAAGACCGCAGCACAGTGACGGACTCTCTCCTCACGGGCAGTGTGGGGTTCTGTCAGTGCTCTCTGTTGGAGTCCCGGCCCGGGTCCGCTCTACTGGCCCACCCCACAGAACACATGGAGGAGGTGAGCGTGGTGGAGATGAGGAGCTGGACTCCGGTGTGCACTCTGAAACCTGATTCAAAGCTGGGGATGCTCATGTGTATGAAGATGTGGCAGGCGGATTCTGGTCCTGTTCTGTGTGCTGGGTATGAGGACGGCTCTCTGGTGTTATGGGATGTTTCCCATCGCCGTCCGTTCAGCTGTCTGAAGGCGCATCCTGAGCCAGTCATGTGTCTAGATGTTGATGTATGCAGGCAGAAAGGCATTTCTGGGTCTTCAGAGAAGATTCTCCAATCCTGGACATTTGACAAGCAGCAAAACCTTCAGATGCACGACTCCGTTCAGATGACCAATCCTGGGGTCTCCCAGCTGCGTATCCGTGCAGACGGCAAGATCCTAGCAACGGCGGGGTGGGACAACAACATCAGAGTGTTTGGCTTGAAGAAACTGAAGCCACTGGCTGTTCTGCAACATCATACTGACATGGTGAATAGTGTGGCCTTCTCAGACCATCAGGACCCCCCACAGAGACTTTTGGCCGCAGGGTCCAAGGACCAGCGGATCAGTGTGTGGTCTATATATAGCGAAAGT

Function

symbol description
gnb1l Orthologous to human GNB1L (G protein subunit beta 1 like).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000071_03414821_03439810.mRNA True 858 mRNA 0.54 5 3414821 3439810

Neighbor

gene id symbol gene type direction distance location
CI01000071_03361493_03387786 NA coding upstream 26943 3361493 ~ 3390180 (+)
CI01000071_03329447_03356262 TAOK3A, TAOK3 coding upstream 57669 3329447 ~ 3357152 (+)
CI01000071_03108610_03108994 NA coding upstream 305827 3108444 ~ 3108994 (+)
CI01000071_03062277_03064334 XBP1 coding upstream 350115 3061838 ~ 3064706 (+)
CI01000071_03016024_03022596 NA coding upstream 391827 3014670 ~ 3022994 (+)
CI01000071_03756518_03756925 NA coding downstream 314946 3754756 ~ 3757404 (+)
CI01000071_03793473_03817709 SEMA4C coding downstream 352908 3792718 ~ 3819100 (+)
CI01000071_03825614_03840052 NA coding downstream 385804 3825614 ~ 3840217 (+)
CI01000071_03857495_03897333 KAT6A coding downstream 417685 3857495 ~ 3897490 (+)
CI01000071_03901048_03909621 AP3M2 coding downstream 461238 3901048 ~ 3910637 (+)
G282161 NA non-coding upstream 96836 3303810 ~ 3317985 (+)
G282198 NA non-coding upstream 137463 3275566 ~ 3277358 (+)
G282221 NA non-coding upstream 148365 3266225 ~ 3266456 (+)
G282220 NA non-coding upstream 148992 3265511 ~ 3265829 (+)
G282169 NA non-coding downstream 2135 3441945 ~ 3442509 (+)
G282564 NA non-coding downstream 38187 3477997 ~ 3478508 (+)
G282700 NA non-coding downstream 165194 3605004 ~ 3700682 (+)
G282714 NA non-coding downstream 180694 3620504 ~ 3689232 (+)
G282716 NA non-coding downstream 237393 3677203 ~ 3681222 (+)
G282080 NA other upstream 358290 3056084 ~ 3056531 (+)
CI01000071_02815324_02834097 NA other upstream 586217 2815127 ~ 2835525 (+)
CI01000071_01374449_01376813 NA other upstream 2037151 1373996 ~ 1377670 (+)
G280443 NA other upstream 2492725 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 2611504 791346 ~ 803317 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_030914 gnb1l coding NC_007116.7 CM002889.2 15222011 ~ 15283509 (-)