G280341


Basic Information

Item Value
gene id G280341
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 648064 ~ 648656 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU317848
GGGCGAGAGGGTGATGTTTCCAATAGAGGCCTTCAGCTCGTCGATGGTGGCTTTGTGTTGGTGTGTGCCGTTGTTGGTCTGCACGGGTTTGATCTGAACGTGGAATTTTCTTGGCTCATCCTCATCTTCTGAGTCACTGGATGAATAAAAGGAGTTCTCTTTGGCATCATTCTCGTTGACTTCTGGTCGGATACAGAAGCCCTCCTCGTCCAGCTGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU317848 True 219 lncRNA 0.51 2 648064 648656

Neighbor

gene id symbol gene type direction distance location
CI01000071_00544529_00545575 FOXD1 coding upstream 102223 544249 ~ 545841 (+)
CI01000071_00531716_00534432 ANKRA2 coding upstream 113102 530382 ~ 534962 (+)
CI01000071_00335696_00339048 NA coding upstream 308491 335049 ~ 339573 (+)
CI01000071_00329399_00333840 ENC1, CCIN coding upstream 313580 329399 ~ 334484 (+)
CI01000071_00305940_00316066 GFM2 coding upstream 331595 305114 ~ 316469 (+)
CI01000071_00707882_00708320 NA coding downstream 58232 706888 ~ 709581 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 coding downstream 142690 791346 ~ 803317 (+)
CI01000071_00807216_00807677 NA coding downstream 158175 806831 ~ 808142 (+)
CI01000071_00825247_00853236 GIT2A, GIT2 coding downstream 176283 824939 ~ 853754 (+)
CI01000071_00867024_00871868 NA coding downstream 218185 866841 ~ 873319 (+)
G280373 NA non-coding upstream 86842 560987 ~ 561222 (+)
G280372 NA non-coding upstream 87868 559968 ~ 560196 (+)
G280236 NA non-coding upstream 409514 238102 ~ 238550 (+)
G280207 NA non-coding upstream 475949 171908 ~ 172115 (+)
G280155 NA non-coding upstream 581387 37532 ~ 66677 (+)
G280411 NA non-coding downstream 77997 726653 ~ 727370 (+)
G280413 NA non-coding downstream 89309 737965 ~ 776111 (+)
G280449 NA non-coding downstream 250162 898818 ~ 899610 (+)
G280477 NA non-coding downstream 254211 902867 ~ 903174 (+)
G280443 NA other downstream 256561 905217 ~ 922096 (+)
CI01000071_01374449_01376813 NA other downstream 725927 1373996 ~ 1377670 (+)
CI01000071_02815324_02834097 NA other downstream 2155988 2815127 ~ 2835525 (+)
G282080 NA other downstream 2407428 3056084 ~ 3056531 (+)

Expression


Co-expression Network