G280479


Basic Information

Item Value
gene id G280479
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 904632 ~ 904864 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318016
CGACGCGTTGTCAGTGTCCGCTTTGCTCCACAATGTATTTTTCACTGCGTGAGAACATGATGTGTGGCAGCATGGCTTGTCGAACATAACAGTAGGCTAACTAAAGCAGTGTTGCCAAGTTCGTGGTTTTCCCACAGAATTGGGCAATTTTTACATTGTTTCCGCGGGTTGAAACAAACCCGAATAACATGATATTTAGCCCCTGAATAGCGAATTTTACAAGGGGAACCCCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318016 True 233 lncRNA 0.45 1 904632 904864

Neighbor

gene id symbol gene type direction distance location
CI01000071_00880705_00897817 TRPV4 coding upstream 6187 880705 ~ 898445 (+)
CI01000071_00867024_00871868 NA coding upstream 31313 866841 ~ 873319 (+)
CI01000071_00825247_00853236 GIT2A, GIT2 coding upstream 50878 824939 ~ 853754 (+)
CI01000071_00807216_00807677 NA coding upstream 96490 806831 ~ 808142 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 coding upstream 101503 791346 ~ 803317 (+)
CI01000071_00923006_00927912 NA coding downstream 17888 922752 ~ 928488 (+)
CI01000071_00965582_00968758 NA coding downstream 60137 965001 ~ 969361 (+)
CI01000071_00971517_00971823 NA coding downstream 66173 971037 ~ 972217 (+)
CI01000071_01086147_01088260 NA coding downstream 181283 1086147 ~ 1088399 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 208284 1113148 ~ 1116722 (+)
G280478 NA non-coding upstream 619 903783 ~ 904013 (+)
G280477 NA non-coding upstream 1458 902867 ~ 903174 (+)
G280449 NA non-coding upstream 5022 898818 ~ 899610 (+)
G280413 NA non-coding upstream 128521 737965 ~ 776111 (+)
G280505 NA non-coding downstream 36531 941395 ~ 943005 (+)
G280537 NA non-coding downstream 105668 1010532 ~ 1010771 (+)
G280558 NA non-coding downstream 149934 1054798 ~ 1055116 (+)
G280560 NA non-coding downstream 154125 1058989 ~ 1059265 (+)
G280561 NA non-coding downstream 154817 1059681 ~ 1059906 (+)
G280443 NA other downstream 353 905217 ~ 922096 (+)
CI01000071_01374449_01376813 NA other downstream 469719 1373996 ~ 1377670 (+)
CI01000071_02815324_02834097 NA other downstream 1899780 2815127 ~ 2835525 (+)
G282080 NA other downstream 2151220 3056084 ~ 3056531 (+)

Expression


Co-expression Network