G280558


Basic Information

Item Value
gene id G280558
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1054798 ~ 1055116 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318101
TGCTGTCTGTCAGTCACCACATCGGTGATACTGTACTTCGGAATCACAGATTGTAGTCTTGGAAGTACGACCAAAATAAGAATTTTCACTGGAAAATGTCATCTGAACAAGTAACATGTCTGCCACTTTTGTTCTGACCAACTGAGGGGGGGAAAAAAAGCATTACAATAAATTGCGCTGCCAATGGTGATTAAATCTAACGATTGCTTAGCTCGGATCCCGTCAAACCATGCAAATTATTATTATTGTTATACTTTGTTCTTAAATTGTTAATGTTAACAACATCAGCATTGCGTGACTATGTGTATTTAGTGTTTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318101 True 319 lncRNA 0.37 1 1054798 1055116

Neighbor

gene id symbol gene type direction distance location
CI01000071_00971517_00971823 NA coding upstream 82581 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 85437 965001 ~ 969361 (+)
CI01000071_00923006_00927912 NA coding upstream 126310 922752 ~ 928488 (+)
CI01000071_00880705_00897817 TRPV4 coding upstream 156353 880705 ~ 898445 (+)
CI01000071_00867024_00871868 NA coding upstream 181479 866841 ~ 873319 (+)
CI01000071_01086147_01088260 NA coding downstream 31031 1086147 ~ 1088399 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 58032 1113148 ~ 1116722 (+)
CI01000071_01139373_01146663 FOXN4 coding downstream 83948 1139064 ~ 1146678 (+)
CI01000071_01374449_01376813 NA coding downstream 318880 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 325442 1380558 ~ 1388948 (+)
G280537 NA non-coding upstream 44027 1010532 ~ 1010771 (+)
G280505 NA non-coding upstream 111793 941395 ~ 943005 (+)
G280479 NA non-coding upstream 149934 904632 ~ 904864 (+)
G280478 NA non-coding upstream 150785 903783 ~ 904013 (+)
G280477 NA non-coding upstream 151624 902867 ~ 903174 (+)
G280560 NA non-coding downstream 3873 1058989 ~ 1059265 (+)
G280561 NA non-coding downstream 4565 1059681 ~ 1059906 (+)
G280563 NA non-coding downstream 10340 1065456 ~ 1065967 (+)
G280565 NA non-coding downstream 12171 1067287 ~ 1067520 (+)
G280568 NA non-coding downstream 19745 1074861 ~ 1075309 (+)
G280443 NA other upstream 132702 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 251481 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1749528 2815127 ~ 2835525 (+)
G282080 NA other downstream 2000968 3056084 ~ 3056531 (+)

Expression


Co-expression Network