G280561


Basic Information

Item Value
gene id G280561
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1059681 ~ 1059906 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318104
AATAATCTTGTTTTCCGTTTGCATTAAGATTATTTTTATTACCACACTGGCAGATACTGATAATTTTAAGTAAAATGCACTTAATTTAGATCCCCCCAGAAAACAAGACTAAATATCTTATATCATTTCCTTATATAGAAAATCCATCTTGATTTAAGAATTTTTAGATATTTGTACTTGAAATAGGACAAAAAAATACTCAAAGCATTTTTGCAGCGTGAATGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318104 True 226 lncRNA 0.27 1 1059681 1059906

Neighbor

gene id symbol gene type direction distance location
CI01000071_00971517_00971823 NA coding upstream 87464 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 90320 965001 ~ 969361 (+)
CI01000071_00923006_00927912 NA coding upstream 131193 922752 ~ 928488 (+)
CI01000071_00880705_00897817 TRPV4 coding upstream 161236 880705 ~ 898445 (+)
CI01000071_00867024_00871868 NA coding upstream 186362 866841 ~ 873319 (+)
CI01000071_01086147_01088260 NA coding downstream 26241 1086147 ~ 1088399 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 53242 1113148 ~ 1116722 (+)
CI01000071_01139373_01146663 FOXN4 coding downstream 79158 1139064 ~ 1146678 (+)
CI01000071_01374449_01376813 NA coding downstream 314090 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 320652 1380558 ~ 1388948 (+)
G280560 NA non-coding upstream 416 1058989 ~ 1059265 (+)
G280558 NA non-coding upstream 4565 1054798 ~ 1055116 (+)
G280537 NA non-coding upstream 48910 1010532 ~ 1010771 (+)
G280505 NA non-coding upstream 116676 941395 ~ 943005 (+)
G280479 NA non-coding upstream 154817 904632 ~ 904864 (+)
G280563 NA non-coding downstream 5550 1065456 ~ 1065967 (+)
G280565 NA non-coding downstream 7381 1067287 ~ 1067520 (+)
G280568 NA non-coding downstream 14955 1074861 ~ 1075309 (+)
G280546 NA non-coding downstream 29534 1089440 ~ 1089716 (+)
G280599 NA non-coding downstream 49321 1109227 ~ 1110463 (+)
G280443 NA other upstream 137585 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 256364 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1744738 2815127 ~ 2835525 (+)
G282080 NA other downstream 1996178 3056084 ~ 3056531 (+)

Expression


Co-expression Network