G280565


Basic Information

Item Value
gene id G280565
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000071
NCBI id null
chromosome length 5214881
location 1067287 ~ 1067520 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU318108
CCGAGTCATAATAGATGGAGAATGAAACCACAGAATTAGCATGTATATCTCCACGGTTGAAACTGATAGCTGGAGATGAAATGGTTCAATCACTCTAAGTAGCATGGATGATTTCTCATACATCAAGATGGTATATCTTCAATTTTAATTTATTCAAATGCAGATCAAATCGGTTGATCTGCATGAGATGGGATTGAACTCGGCACGGATGCCAACTGCTTGTTTCAATTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU318108 True 234 lncRNA 0.37 1 1067287 1067520

Neighbor

gene id symbol gene type direction distance location
CI01000071_00971517_00971823 NA coding upstream 95070 971037 ~ 972217 (+)
CI01000071_00965582_00968758 NA coding upstream 97926 965001 ~ 969361 (+)
CI01000071_00923006_00927912 NA coding upstream 138799 922752 ~ 928488 (+)
CI01000071_00880705_00897817 TRPV4 coding upstream 168842 880705 ~ 898445 (+)
CI01000071_00867024_00871868 NA coding upstream 193968 866841 ~ 873319 (+)
CI01000071_01086147_01088260 NA coding downstream 18627 1086147 ~ 1088399 (+)
CI01000071_01113148_01115596 KCTD10 coding downstream 45628 1113148 ~ 1116722 (+)
CI01000071_01139373_01146663 FOXN4 coding downstream 71544 1139064 ~ 1146678 (+)
CI01000071_01374449_01376813 NA coding downstream 306476 1373996 ~ 1377670 (+)
CI01000071_01380924_01388813 RANBP1 coding downstream 313038 1380558 ~ 1388948 (+)
G280563 NA non-coding upstream 1320 1065456 ~ 1065967 (+)
G280561 NA non-coding upstream 7381 1059681 ~ 1059906 (+)
G280560 NA non-coding upstream 8022 1058989 ~ 1059265 (+)
G280558 NA non-coding upstream 12171 1054798 ~ 1055116 (+)
G280537 NA non-coding upstream 56516 1010532 ~ 1010771 (+)
G280568 NA non-coding downstream 7341 1074861 ~ 1075309 (+)
G280546 NA non-coding downstream 21920 1089440 ~ 1089716 (+)
G280599 NA non-coding downstream 41707 1109227 ~ 1110463 (+)
G280614 NA non-coding downstream 139755 1207275 ~ 1207574 (+)
G280628 NA non-coding downstream 175776 1243296 ~ 1243520 (+)
G280443 NA other upstream 145191 905217 ~ 922096 (+)
CI01000071_00792254_00802384 SLC6A4B, SLC6A4 other upstream 263970 791346 ~ 803317 (+)
CI01000071_02815324_02834097 NA other downstream 1737124 2815127 ~ 2835525 (+)
G282080 NA other downstream 1988564 3056084 ~ 3056531 (+)

Expression


Co-expression Network